Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1825 ATGGAACCAGAATCTGGAGCTTCGACTTCTCGGAATCTTTCTCAGTTGTCCTGGGTGAACCTCTCTAGGAATCTGTTATTAGCATATCAAAGCTTTGGTGTGGTGTATGGAGATCTGAGCACTTCACCTCTCTATGTCTTTACAAGCACGTTCAAGGGAAAGTTACGGAATCACCATGATGAAGAAACTATATTTGGCACGTTTTCGTTGATTTTTTGGACCCTTACCTTGATTCcgttacttaaatatatattcatccTATTGAGTGCTGATGACAACGGGGAAGGTGGAACATTTGCTCTTTATTCACTTCTCTGCAGGCATGCCAAGTTTAATTTACTCCCCAATCAACAAGCAGCTGATGAGGAGTTATCATCCTATAAATATGGTCCCTCATCACAGGCTGTAGCCTCTTCTCCATTAAAGAGGTTTCTGGAGAAGCATAAAAGGTTAAGAACAGCCCTGCTTGTTGTGGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGTGTGCTTACTCCAGCAATTTCAGTTCTAGCATCAGTATCGGGATTAAAAGTTacagaaagaaaattaacagATGGTGAACTTGTCCTGCTTGCCTGTGTCATATTGGTTGGATTGTTTGCTCTCCAACATTGTGGCACGCACAAAGTAGCATTTATGTTTGCGCCAATTGTAATTATCTGGCTTGTATCCATATTTTCTGTTGGGCTGTATAATACAATTCATTGGAATCCAAAAATAGTTCATGCTATATCACCGTATTATATCATCAAGTTTTTTACCAAGACTGGTAAAGAAGGTTGGATTTCTCTTGGAGGGATACTTCTCTGTATAACCGGAACTGAAGCTATGTTTGCGGATCTTGGTCATTTCACTGCTTTGTCGATAAGGCTTGCATTTGCGTTTGTTATATACCCATGTTTGGTGGTACAGTACATGGGTCAAGCTGCTTTTTTGTCTAAAAACCTCAACTCTGTTGATAACAGTTTTTATGACTCAATACCTGAACCTGTGTTTTGGCCTGTTTTTGTTATTGCCACCCTTGCCGCAATTGTTGGGAGCCAAGCTGTTATAACTGCAACTTTCTCCATCATCAAGCAATGTCATGCGCTTGGTTGCTTTCCACGAGTCAAAGTTGTACACACctcaaaacatatatatggaCAGATCTATATCCCAGAAATCAATTGGATACTTATGATCCTAACTCTTGCTATAACCATTGGATTTCAGGACACAACCATAATTGGAAATGCGTATGGACTCGCTTGTATGACAGTTATGTTTGTGACTACATTTCTGATGACACTAGTCACAATCTTTGTCTGGCAGAAAAGTGTCTCGATTgctatattatttcttttattcttttggaTGATAGAGGGCGTATATCTATCAGCAGCGTTCATCAAAGTGCCTCAGGGAGGATGGGTTCCTCTAGTCTTATCATTCATCTTCATGGTTGTTATGTACGTGTGGCACTATGGTACTCGTAGGAAGTACAGCTATGATCTGCACAACAAAGTTTCATTGAAATGGTTACTGGGCTTGGGCCCTAGCCTTGGTATTGTTCGTGTCCCAGGGATTGGTCTCATCTACACTGAACTGGCAACAGGAATACCTGCAATATTTTCCCATTTTGTAACAAATCTTCCTGCATTTCACAATGTGTTGGTTTTTGTTTGTGTAAAATCAGTTCCTGTTCCATATGTTTCACCCGAAGAACGTTTCCTTGTTGGGCGAGTTTGCCCCAGACCATATCGTATGTATAGGTGCATTGTCAGGTATGGTTACAAGGACATTCAAAGGGATGATGGAGATTTTGAGAATCATCTTATACAGAGTATAGCTGAATTTATCCAAATGGAAGCAGTGGAACCCCAGTTCTCAAGTTCTGAAGCTTCTTCACTTGATGGGAGGATGGCTGTTGTAAGTTCTAGAAACTTAGCATCTACTTCAAGTTTAATAGTTTCTGAGCATGAGGATATTGGCGTGGACATATCCATCCCTAGCAGCAGATCTGTAACCTTGCGAAGTTTGCAATCGATTTATGATGATGAAAGTCCACAAGTTACAAGGCGACGAGTAAGATTTCAGCTACCTAACAATCCTGGTATGGTTCCTGATGTTAGGGAAGAGCTTATAGATTTAATTCAAGCTAAGGATGCTGGGGTTGCATATATAATGGGGCACTCGTATGTGAAGGCAAGGAAATCATCCTCATTTTTGAAAAAGCTCGTGATTGATATTGGGTACTCATTTCTGCGGAAGAATTGCAGGGGTCCAGCTGTAGCTCTTAACATTCCTCACATCAGTCTTATCGAAGTTGGAATGATATATTATGTGTAG 2355 0.3953 MEPESGASTSRNLSQLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVFTSTFKGKLRNHHDEETIFGTFSLIFWTLTLIPLLKYIFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAVASSPLKRFLEKHKRLRTALLVVVLFGACMVIGDGVLTPAISVLASVSGLKVTERKLTDGELVLLACVILVGLFALQHCGTHKVAFMFAPIVIIWLVSIFSVGLYNTIHWNPKIVHAISPYYIIKFFTKTGKEGWISLGGILLCITGTEAMFADLGHFTALSIRLAFAFVIYPCLVVQYMGQAAFLSKNLNSVDNSFYDSIPEPVFWPVFVIATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTIIGNAYGLACMTVMFVTTFLMTLVTIFVWQKSVSIAILFLLFFWMIEGVYLSAAFIKVPQGGWVPLVLSFIFMVVMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYTELATGIPAIFSHFVTNLPAFHNVLVFVCVKSVPVPYVSPEERFLVGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENHLIQSIAEFIQMEAVEPQFSSSEASSLDGRMAVVSSRNLASTSSLIVSEHEDIGVDISIPSSRSVTLRSLQSIYDDESPQVTRRRVRFQLPNNPGMVPDVREELIDLIQAKDAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1825 784 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu4g1825 784 TIGRFAM kup: potassium uptake protein 27 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu4g1825 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Ssu4g1825 784 PANTHER POTASSIUM TRANSPORTER 4 20 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1825 Ssu-Chr4 33173563 33178659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1825 1 784 Inorganic Solute Cotransporters AT3G02050 79.341 0.0 1252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1825 K03549 - gmx:100790329 1473.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1825 4 33173563 33178659 Ssu4g1825 4 33173563 33178659 ECH