Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1799 ATGCTCAAGAACAGAAGCACACTGAACGTTGAAGCCGATGCAGTTTCAGTGTTGAGTGGAAACCAAGAGGGAGCTTATCAATGGGTGACTATTAACTATCTACTGGGAAACTTGGGAAAGCATTATTCAAAGACGGTTGCTGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCTTACGCAGTCTCAGAGACAGATGCTGCGAAGGCTCCAGAATCACCAGACGGGGTGGAATCATACATAACGGAGATGTTCCTCAGGGGAAAGAAATATTACCTCTATGTACACAGTTACTTGCGCTACGGTTTGCTAGCAGCTCGTGCAGAGGTTTTAAAGGTTTCTTGTAATTCTGAAAACCCTTGTATTTTGGCTGGCTTTGACGGGTATTACAAATATGGAGGAGTGGAGTATAAGGCCGCAGCTCCCCCTCCTGGCTCAAGCTTCAGCGAATGCcaaaatgttgttcttgagGCTCTCAATGTTAATGCAACATGCACTTATAAGGGATGCAGTTTCGGTGGGATATGGAATGGTGGTGGGGGAGCAGgagaaaacaacttttttgttGCCTCATTTTTCTTTGAAGTGGCCGATGAGGCTGGTTTTGTTGATCCAAACGCACCCAATGCCAAAGTTCGTCCTGTGGATTTTGAGAATGCAGCAAAGGTTGCTTGTAAGACAGAATTAAAGGATCTCAAGTCTGTTTTCCCTCGTGTTAAGGATGGAGACGTTCCTTATATATGCTTAGATCTTGTATACCAATATACATTGCTAGTTGATGGATTTGGCATAGATCCCCAGCAAGAGATTACGTTGGTGAAGCAAATTCAGTATCAGGATTCTCTCGTGGAAGCAGCGTGGCCACTAGGCAGTGCCATAGAAGCCATATCATCGTTgcctaaatttgagaaattaatgtACTTCGTTTAA 930 0.4215 MLKNRSTLNVEADAVSVLSGNQEGAYQWVTINYLLGNLGKHYSKTVAVVDLGGGSVQMAYAVSETDAAKAPESPDGVESYITEMFLRGKKYYLYVHSYLRYGLLAARAEVLKVSCNSENPCILAGFDGYYKYGGVEYKAAAPPPGSSFSECQNVVLEALNVNATCTYKGCSFGGIWNGGGGAGENNFFVASFFFEVADEAGFVDPNAPNAKVRPVDFENAAKVACKTELKDLKSVFPRVKDGDVPYICLDLVYQYTLLVDGFGIDPQQEITLVKQIQYQDSLVEAAWPLGSAIEAISSLPKFEKLMYFV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1799 309 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 18 33 IPR000407 GO:0016787
Ssu4g1799 309 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 298 IPR000407 GO:0016787
Ssu4g1799 309 Pfam GDA1/CD39 (nucleoside phosphatase) family 2 301 IPR000407 GO:0016787
Ssu4g1799 309 Gene3D Exopolyphosphatase. Domain 2 19 277 - -
Ssu4g1799 309 PANTHER APYRASE-LIKE PROTEIN 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1799 Ssu-Chr4 32578297 32581706 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1799 1 298 Calmodulin-binding Proteins AT3G04080 65.552 1.01e-133 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1799 K14641 - gmx:100787491 553.518