Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1763 ATGAACTCCTCCGATTTGGAAACCTATGATTCCATTTTCATAAACTGGAATGACACGCTGCAGGTCTGTTTCAATAGGACTGCATCCCACGGTTCAGCCCTTTGGATAGAAAATTCCGTGGAGAAAACTCTCCCTTCATTTGTTCTGCAATTTGCAATTATCTTAGCGCTCAACCGCTTTTTGCTCCTTGTTTCAGCACAATACCATGTACCTCGTATTGTGGCCAATATTTTTACTGGTTTTCTATTAGGTCCATCTGTTCTGGGACGTTGGAATGCTTTTATCAAAAACACATTTCCGTTTAGTAACATGGTGCCATTAGAGACGGTGGGAGCGGTGATCCTTGTTTACTACGTGTTCATGCTGGGTCTAGAGATAGACTTCAAACCAATAACGAGGTTGCACCACAAGGCCGCGCTTGTTGCCATTGCTGGCACAATCTTCACCTCACCAATTGGGTGTGGCTTGTACTTCATGCTGGTCACCGACATGGGGCGCAAATCTTTGTCCCACGTCAACGTCAAGGGTGCAACGTTGTGGGGAATCACCCTTTCTTGCAGCAGTGAGTTCCCCGAGATTGCAAAGATCCTTTCAGACCTTAAGCTTCTCCTCACGGAGAATGGACAACTGGCTCTCACCGCTTGTCTCATCAATGACTTGTTTTCATGGACCCTCCTTGTGTTGGCCCTAACGCATTTCTATTATGCTTCCTTGACATCGCTTGTCATCACTGTGGTGCTTGTGTTGGTGTGTTTTTTCGCACTTCACCCCTTTTTCAAGTGGCTATTCAACAATGTGGGCATGAGGGATCGCGAGTTCCTCGAGTCACAAGTAATATTTGTGCTGCATATAGTTTTGGTCTTTGGGTTTTTAGCTGATGGGTTGGGCGTGCTTTCCATCACGGGGGCTTTCTTTTTGGGTGTTGTGATCCCTCAGGGTGCGCTCAACAATGCGGTGCAGGACAAGGTGCAGGATTTTGTGGCTGTGTTCATGATGCCTTTGTTTTTTGTGGCTGTTGGGGAGAGAATCAAGGTCCAAGACTTTGCCTTGGACACACATGGATCAACCGTGGTGGTTGTTGTTGTGCTGGCCTTTGTGGCAAAGATTGTGTGCACTATGGCGGTCTCTTGGTTCTTCCAGATGCCGCACATGGAAGGACTATCCCTTGCACTGCTCATGAATACTAAAGGAACAATGCCACTGATCATTCTCTGCACCGGCAGGGACAGGCTCGAACTGGACAACCAAACCTTTGGGGTGATGCTGTTGGCGTGCTGGTTAATGACAATTCCCGTGGGACCCGTCTCGGTTGCTTTAACAAAAGCCTCGAAAACCGGAAAGTTTCAGGGAAGCGTGCAAGGCGCAACTCCAGACTCACCCCTCAAAGTACTAGCCTGCATCCACACAAAGCGCGACGCCAACGTGATCATCAACCTCTTAAAAGCCTCGTGCCCCTCAGTGAGAACCCCAATCCAAGTGCTAGCAGTGGAACTAAACAAAATGACCAACCGCCCCGCCTCATCGCTCATCATAAGGGACGCTCGAAAACCGTCCTTCACCTCAAAATCTTTGAGACTAGACACCGAAGACACCCTCGGCAGCTTCGACAACCTCAGCCAAGCCATCTTCggagaaaaaatgagaatcaTCTCCGACTACAACTCCATGCACAAGGACATCCTAAACCTTGCAAGACAAAGAGGTGTCACGCTTATCTTAACCACACTCTACAAGCAACCAACCTACGACGGTTTAGGAGCCGGTGCCGCAACCGCAAGAGCCGTTAACATCATTAACCGCGACCGTGCAAGCAAGGACGAGAAGAAAGTGGTGTTGGAGGGTCTCGTTAGGGACGCAGCGTGTTGCGTGGCGATATTTGTGGACAGAGGGTTGAGTCATAATCGTTCCAAGGAGCAACGTGTGGCTATGTTTTACATTGCGGGTGCTGACGATCGTGAAGCGCTTTGTTATGCGTGGAGAATGAGTGGGAGCCCCGAGGTGAAGTTAACGGTGGTGAGGCTTGTTTGGGAGAACCCTAACGACGAGTTTGACGAAACGGACAAGGAGTTCATCAAGGGGTTTGTGCAACAATCGGGGGACGTGCCGAGGGTGAGGTATTTGGAGAAGGCGGTGAGGGATGAGAAGGAGACGGTGAAGCTTTTGAACAAGGTGGGGAGCAAAGGGTTTGATTTGTATGTGGTGGGGAGAGGGCACGGGAGGAAGATGTCGTTGGCACAAACGGTGGATCCTGTGCTGGAGGAGCCTGCGTTGGGGCCTCTTGGGGATGCTTTGACCGATCTGAACTCTGCGGCCGAGACCTCTATTTTGATATTCCAAAGACAGGCTCAACATGTTGAAGAAGGGAAGCATGCGGGGTCTGCATCTGCTTCCCAAAAAGGGTTTGATAGCATGGTGGACCAGCAGTTACTGTACCCTCCAACGAGGTCTCCGCCGATGCTTTTCGGTCACTATGCTTGA 2478 0.496 MNSSDLETYDSIFINWNDTLQVCFNRTASHGSALWIENSVEKTLPSFVLQFAIILALNRFLLLVSAQYHVPRIVANIFTGFLLGPSVLGRWNAFIKNTFPFSNMVPLETVGAVILVYYVFMLGLEIDFKPITRLHHKAALVAIAGTIFTSPIGCGLYFMLVTDMGRKSLSHVNVKGATLWGITLSCSSEFPEIAKILSDLKLLLTENGQLALTACLINDLFSWTLLVLALTHFYYASLTSLVITVVLVLVCFFALHPFFKWLFNNVGMRDREFLESQVIFVLHIVLVFGFLADGLGVLSITGAFFLGVVIPQGALNNAVQDKVQDFVAVFMMPLFFVAVGERIKVQDFALDTHGSTVVVVVVLAFVAKIVCTMAVSWFFQMPHMEGLSLALLMNTKGTMPLIILCTGRDRLELDNQTFGVMLLACWLMTIPVGPVSVALTKASKTGKFQGSVQGATPDSPLKVLACIHTKRDANVIINLLKASCPSVRTPIQVLAVELNKMTNRPASSLIIRDARKPSFTSKSLRLDTEDTLGSFDNLSQAIFGEKMRIISDYNSMHKDILNLARQRGVTLILTTLYKQPTYDGLGAGAATARAVNIINRDRASKDEKKVVLEGLVRDAACCVAIFVDRGLSHNRSKEQRVAMFYIAGADDREALCYAWRMSGSPEVKLTVVRLVWENPNDEFDETDKEFIKGFVQQSGDVPRVRYLEKAVRDEKETVKLLNKVGSKGFDLYVVGRGHGRKMSLAQTVDPVLEEPALGPLGDALTDLNSAAETSILIFQRQAQHVEEGKHAGSASASQKGFDSMVDQQLLYPPTRSPPMLFGHYA 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1763 825 Pfam Sodium/hydrogen exchanger family 54 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu4g1763 825 PANTHER CATION/H+ EXCHANGER 3 18 789 - -
Ssu4g1763 825 Gene3D - 45 447 IPR038770 -
Ssu4g1763 825 PANTHER CATION/H + ANTIPORTER 18 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1763 Ssu-Chr4 31702947 31706909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1763 17 780 Antiporter Super Family AT2G13620 31.553 1.27e-123 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1763 - - gmx:100780176 1255.35