Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1708 ATGAAGATCATAATCCTCTTCTTTCACTTCATACTTCCCTCGGCATTCGCAGATTTGAGGGTTGGATTCTATGCTTCCTCATGCCCCAAAGCGGAGTCTATTGTGCAGAAAGTGGTTCAGAATCGATTCAATCGTGACAAGTCCATTACCGCAGCCTTGCTTCGCATGCATTTCCATGACTGTGCTGTCAGAGGTTGTGATGCATCCATACTCATAAACTCCACCAAGGCTAACACGGCAGAGAAGGATTCAGGAACAAACTTCGGCGTTCGGGGATACGACCTCATTGATGAAGTGAAGGAGAGCCTTGAAGCTGCATGTCCTTCAACGGTGTCATGTGCAGATATCATAACACTAGCTACCCGAGATGCCGTGGCCTTATCTGGAGGACCCAAATACGATGTTCCCACGGGAAGGCGCGACGGATTAGTCTCTAACATCAACGATGTTGGAATTCCAGGACCCAGCAGTTCCGTGTCCGCAATATCTCAATTTTTTGCAAGTAAAGGCATAACCACACAGGAAATGGTGACCCTTTTCGGAGCACACACGGTTGGTGTGGCACAGTGCGGTTTCTTTGCTAATAGACTCTCGAGCTCCGGGGGGAAACCTGACCCTACAATGGACCCTGCGTTGGATGCTAAGTTGGTGAAGCTGTGCAAGTCATCAAGGGGTGATGACCCAACCGCGTCTTTGGACCAGAAGACTTCTTTTCTTGTTGATAACGAGTTCTACAAGCAGATTCTCGTGAAGAAAGGGGTGTTGCAGATTGATCAGCAACTTGCCTTGGATACAAGTACCAAAGGGTTTGTGTCAGATTTCGCGTCAAATGGTGATAAGTTCCAAAAGAGCTTTGCAAATGCGATGATAAAGATGGGGAAGATTGATGCTCTGGTTGGGAATCAAGGAGAAATCCGCAGGAAATGCTCGGCTTTCAATAACCGCGACCTAGAATTAATGGATAAAGCTATAGGAACTAGCTAG 984 0.4726 MKIIILFFHFILPSAFADLRVGFYASSCPKAESIVQKVVQNRFNRDKSITAALLRMHFHDCAVRGCDASILINSTKANTAEKDSGTNFGVRGYDLIDEVKESLEAACPSTVSCADIITLATRDAVALSGGPKYDVPTGRRDGLVSNINDVGIPGPSSSVSAISQFFASKGITTQEMVTLFGAHTVGVAQCGFFANRLSSSGGKPDPTMDPALDAKLVKLCKSSRGDDPTASLDQKTSFLVDNEFYKQILVKKGVLQIDQQLALDTSTKGFVSDFASNGDKFQKSFANAMIKMGKIDALVGNQGEIRRKCSAFNNRDLELMDKAIGTS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1708 327 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Ssu4g1708 327 ProSiteProfiles Plant heme peroxidase family profile. 18 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PANTHER PEROXIDASE 25-RELATED 15 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PANTHER PEROXIDASE 15 314 - -
Ssu4g1708 327 Gene3D - 22 313 - -
Ssu4g1708 327 Pfam Peroxidase 35 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 SUPERFAMILY Heme-dependent peroxidases 18 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 Gene3D Peroxidase, domain 2 153 292 - -
Ssu4g1708 327 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1708 327 CDD secretory_peroxidase 19 312 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1708 Ssu-Chr4 30087780 30090059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1708 4 314 Peroxidase AT4G26010 58.013 3.02e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1708 K00430 - gmx:100777946 511.916