Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1707 ATGAAGTTCaccattctttttcttatcttcttctttgtcTTTCCCATTGCATTTGCTGATCTTAGGGTTGGATTCTATAGCTCTAGCTGCCCAAGAGCAGAGGACATTGTACGTCAAGTTGTTCAGAGGAATTTCAACCGCGATAGATCCATTACCGCTGCCTTGCTTCGCATGCACTTCCATGACTGCTTTGTCAGAGGATGTGACGCGTCCATACTAATAGACTCGAGCAGGGGCAATCGATCCGAGAAAGCTGCAGGGGCAAACGGCACCGTTAGGGGATTCGAGCTTATAGACGAGGCCAAAAGAACCTTAGAAGGAGCGTGTCCTTCAACGGTTTCATGCGCCGATATAATAACACTCGCCACACGAGATTCCGTGGCCATGGCGGGTGGGCCCAAATACGACGTCGCTACAGGAAGACGCGACGGGCTCGTGTCCCAATCCTCCGAAGTGAACCTGCCCGGGCCAGGATCCTCTGTGTCGCAGGCGTTGCAAGCCTTCACCGCGAACGGCATGTCGTTGGACGAAATGGTCACCCTCCTGGGAGCGCACACGGTGGGTTTCACGCACTGCAGTTTCGTTCGAGGCAGGCTCAGTGACCCCAACATGGACCCGGCTTTGCGGGCCCAGTTGGGCCGGATATGCGGGTCCACGGGGAGAGACCCCAGGTTGTTTTTGGACCAGAACACGTCGTTTGCGTTTGACAACGAGTTCTACAACCAGATTATTTTGCAGAGAGGGGTGCTTTTTCTTGATCAGCAATTGGCCTTGGACCCTTCGTCCAGAGGGTTGGTCTCCACTTTTGCCGGGAATGAGGCGGGCTTTCAGAGGAGTTTTGTTGATGCTATTGTAAAGATGGGAAGCATTAAGGTTTTGGTAGGGAATGATGGAGAGATTAGGAAAAATTGTAGGGTTTTTAATACCCCTTCGTAG 936 0.5096 MKFTILFLIFFFVFPIAFADLRVGFYSSSCPRAEDIVRQVVQRNFNRDRSITAALLRMHFHDCFVRGCDASILIDSSRGNRSEKAAGANGTVRGFELIDEAKRTLEGACPSTVSCADIITLATRDSVAMAGGPKYDVATGRRDGLVSQSSEVNLPGPGSSVSQALQAFTANGMSLDEMVTLLGAHTVGFTHCSFVRGRLSDPNMDPALRAQLGRICGSTGRDPRLFLDQNTSFAFDNEFYNQIILQRGVLFLDQQLALDPSSRGLVSTFAGNEAGFQRSFVDAIVKMGSIKVLVGNDGEIRKNCRVFNTPS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1707 311 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 Gene3D - 25 308 - -
Ssu4g1707 311 Gene3D Peroxidase, domain 2 155 287 - -
Ssu4g1707 311 PANTHER PEROXIDASE 44-RELATED 12 306 - -
Ssu4g1707 311 ProSiteProfiles Plant heme peroxidase family profile. 20 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 Pfam Peroxidase 37 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 PANTHER PEROXIDASE 25-RELATED 12 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g1707 311 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Ssu4g1707 311 CDD secretory_peroxidase 21 307 IPR033905 GO:0004601|GO:0042744
Ssu4g1707 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Ssu4g1707 311 SUPERFAMILY Heme-dependent peroxidases 20 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1707 Ssu-Chr4 30072092 30074110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1707 3 308 Peroxidase AT4G26010 59.609 2.95e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1707 K00430 - gmx:100820340 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1707 4 30072092 30074110 Ssu9g0392 9 19625100 19627950 PCT