Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu4g1670 | atggaagGACAAATTGTAAAGAAGCCGAAAATACTGTGCCTCCATGGATTCAGAACCAGTGGGAGTTTTCTTAAAAAGCAAATCAGCAAATGGGATCCTTCCCTTTTCACTCAATTTGATATGGAATTCCCAAACGGTAAATATCCTGCTGGAGGGAAATCTGACATAGAAGGCATCTTCCCTCCACCTTACTATGAGTGGTTTCAATTCGAAAAGGACTTCACAGTGTACTTTAACTTGGAAGAATGCATCTCATACTTATGCGAATACATTACAGCCAATGGTCCCTTTGATGGCTTCCTTGGGTTCTCACAGGGCGCAACTCTTTCAGCACTTTTGATAGGTTACCAGGCACAGGGAAAGGTGCTAAGGGAGCATCCACCCATAAAATTTTTCATCTCAATATCAGGAAGCAAATTCAGAGATGCCAGCATATGCGATGTTGCCTACAAAGACCCCATCAAAGCTAACTCTGTTCACTTCATTGGGGACAAAGATTGGCTGAAACTGCCTTCTGAGGATCTTGCATCTGCCTTTGACAAGCCCCTTATAATAAGGCATCCTCAAGGTCACACTGTCCCTCGATTAGATGAAGCGTCCACCTGTCAATTGAGAAATTGGATTACGGAAGTCCTATGCCAACCACAAGTTGGCGACTCAGTTTGTGAGCATGAAACAGACCATGAAGAAAATAAGTCAGAGAAGGGGAGCAAGCTAGAACCCTGTAGTACCAATCAAGACAACGGTGTAAACAGTGTAGAAATAAACAAGGGTTCTGAGACAGTAGAGGTGGCCAAAGCCTGA | 804 | 0.4328 | MEGQIVKKPKILCLHGFRTSGSFLKKQISKWDPSLFTQFDMEFPNGKYPAGGKSDIEGIFPPPYYEWFQFEKDFTVYFNLEECISYLCEYITANGPFDGFLGFSQGATLSALLIGYQAQGKVLREHPPIKFFISISGSKFRDASICDVAYKDPIKANSVHFIGDKDWLKLPSEDLASAFDKPLIIRHPQGHTVPRLDEASTCQLRNWITEVLCQPQVGDSVCEHETDHEENKSEKGSKLEPCSTNQDNGVNSVEINKGSETVEVAKA | 267 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu4g1670 | 267 | MobiDBLite | consensus disorder prediction | 238 | 258 | - | - | |
| Ssu4g1670 | 267 | Gene3D | alpha/beta hydrolase | 4 | 215 | IPR029058 | - | |
| Ssu4g1670 | 267 | PANTHER | ESTERASE OVCA2 | 6 | 235 | - | - | |
| Ssu4g1670 | 267 | SUPERFAMILY | alpha/beta-Hydrolases | 8 | 194 | IPR029058 | - | |
| Ssu4g1670 | 267 | Pfam | Serine hydrolase (FSH1) | 7 | 198 | IPR005645 | - | |
| Ssu4g1670 | 267 | PANTHER | OS07G0687100 PROTEIN | 6 | 235 | - | - | |
| Ssu4g1670 | 267 | MobiDBLite | consensus disorder prediction | 224 | 267 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu4g1670 | Ssu-Chr4 | 29257504 | 29259129 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ssu4g1670 | 7 | 194 | Sulfurtransferasese or Rhodanese | AT1G09280 | 27.273 | 6.45e-12 | 63.5 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu4g1670 | - | - | gmx:100780431 | 489.189 |