Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1651 ATGGGACGAGCCAGGCTTCTGGTTTCAGATTTCGTTCTGTCTTTCATGTGGGTATGGTCGGGTGTTCTCGTTCGTATCATCGTCTTCAAACATCTGGGCTTGGGCCATGCACCTATCGGTGAGGTCGTGAAGACAACGTTATCCGTCGCTAACATGTTCTTCTTCGCGTTCCTCGTGAAGTTTACACGTGGTGGGGCCTACAACCCCCTCACCGTTTTGGCTGATGCTATCTCTGGGGATTTCAACAACTTCCTCCACTGCGTTGGTGCCAGAATCCCCACTCAGGTGCTTGGATCTATTGTTGGAGTCAAACTTCTTATTGATACAATTCCTGAAGTAGGACGGGGACCACGTCTGAATGTAGACATTCATCAGGGTGCACTGACAGAAGGATTACTAACATTTGCAATTGTAACCATTTCACTTGGACTAGCCACAAAAATTCGTGAAAATTTCTTCATGAAGACTTGGATCTCCAGCCTCTCCAAGTTAACACTTCATATACTTGGCTCTGATCTGACTGGTGGTTGCATGAACCCCGCATCGGTAATGGGATGGGCTTATGCTCGAGGGGATCATATAACAAAGGAGCACATCCTTGTATACTGGCTTGCTCCCGTAGAAGCAACTATTTTAGCAGTGTGGACATTCAAATGGCTAGTCCAGCCTGTAAAGGAAGATAAAACAGCCTCAAAAAGTAAATCGGATTGA 711 0.4641 MGRARLLVSDFVLSFMWVWSGVLVRIIVFKHLGLGHAPIGEVVKTTLSVANMFFFAFLVKFTRGGAYNPLTVLADAISGDFNNFLHCVGARIPTQVLGSIVGVKLLIDTIPEVGRGPRLNVDIHQGALTEGLLTFAIVTISLGLATKIRENFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHILVYWLAPVEATILAVWTFKWLVQPVKEDKTASKSKSD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1651 236 Gene3D Glycerol uptake facilitator protein. 3 236 IPR023271 -
Ssu4g1651 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Ssu4g1651 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 - -
Ssu4g1651 236 SUPERFAMILY Aquaporin-like 4 228 IPR023271 -
Ssu4g1651 236 Pfam Major intrinsic protein 5 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ssu4g1651 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ssu4g1651 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ssu4g1651 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ssu4g1651 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ssu4g1651 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1651 Ssu-Chr4 28885669 28887923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1651 1 236 Major Intrinsic Protein MIP AT3G56950 61.181 6.56e-105 302