Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1616 ATGGAGCTCCTCCcgttcctcttcctcttcctctcccttctcttcctctttctctccgTTCATTTCCTCGCAAGAGAAAAACCCCGCAACACCAAAGGCTTCAAAGACTACCCTCTAGTCGGAACCCTACCGGAATTCCTTAAAAACCGCCACCGGTTCCTGGAGTGGAGCACCCAAGTCCTCCGCGACTGCCCCACCAACACCGCCGTCTTCTCCCGCCCCTACAAGCTCTACGGCGTCATAACGGCCAACCCCGACAACGTGGAACACATGCTCAAAACCCGATTCGACAACTACCCCAAGGGCGACCGCTTCATCCACCTCCTCCAAGACTTCCTCGGCCAGGGTATCTTCAACTCGGACAGCGACCTCTGGAAGGTTCAGCGGAAAACTGCGAGCTACGAGTTCAGCACCAAATCACTCCGAAACTTCATTCTCGACACTGTCACCTTCGAACTTCAAACAAGGCTTCTTCCAATTCTCTCCAAAGCCTCGGAATCAGACAGGGTTCTCGATTTGCAGGACCTGTTGGAGCGGTTCACGTTCGACAACGTGTGCAAGCTAGCGTTCAACGTCGACCCGGCGTGTCTCGGCGGCGACGCAACCGCCGTCGCCGAGTTCATGAGCGCGTTCGAGGACGCCGCCGTGCTGAGCTCAGGGAGGTTCATGAGCGTGTTACCGTTCGTGTGGAAAACGAAGAAGCTGTTCAACGTTGGATCAGAGCGGAGGCTCAGAGAATCAATCACCACCGTTCACGAGTTCGCTGACACGATCATACGGTCCAGATTGGATTCCAAGGAACAAACCGAGGACCAAGATTTACTGTCGCGGTTCATCAGAACAGAGGATAGTTCCCCGGAGTTTCTCCGCGATGTTGTGATAAGCTTCATTCTCGCGGGACGCGATACGACGTCGTCCGCGCTGAGCTGGTTCTTCTGGATTTTGTCTTCCAGACCGGACGTGTGGAGAAACATTCGCGACGAAATCGAAAGGGTTCGGACCGCCACGCGCGGCGTTGGCGCGTTTGCGTACGAGGAGCTGAAGGAGATGCATTACTTGCACGCGGCGATTTCGGAGACGATGAGGTTGTACCCGCCCGTGCCCGTTGACACGAAGGCGTGCCTGGACGACGACGTTTTGCCGGATGGAACGAGGGTTGGGAAGGGGTGGTTCCTATCTTACCACACGTACGCGATGGGGAGGATGGAGAGCGTGTGGGGGAAAGACTGTACCGAATTCAAGCCCGAAAGGTGGTTGGAGAATGGGGCGTACGAAGGGGAGAGTCCGTTTCGGTTTCCGGTGTTTCATGCGGGTCCACGAATGTGTTTAGGGAAAGAAATGGCTTATATTCAGATGAAGTCGATCGCGGCTTCGGTTATGGAGAGTTTTGAGATTGAGGCGCTGGATAAGGACACGTGTCCAGAACATGTTTTGTCTTTGACATTGAGGATCAAGGGAGGGTTACCTGTGAGGGTAAGGGTAAGGGATGCTAGGATTATGGGTACGTAG 1509 0.5321 MELLPFLFLFLSLLFLFLSVHFLAREKPRNTKGFKDYPLVGTLPEFLKNRHRFLEWSTQVLRDCPTNTAVFSRPYKLYGVITANPDNVEHMLKTRFDNYPKGDRFIHLLQDFLGQGIFNSDSDLWKVQRKTASYEFSTKSLRNFILDTVTFELQTRLLPILSKASESDRVLDLQDLLERFTFDNVCKLAFNVDPACLGGDATAVAEFMSAFEDAAVLSSGRFMSVLPFVWKTKKLFNVGSERRLRESITTVHEFADTIIRSRLDSKEQTEDQDLLSRFIRTEDSSPEFLRDVVISFILAGRDTTSSALSWFFWILSSRPDVWRNIRDEIERVRTATRGVGAFAYEELKEMHYLHAAISETMRLYPPVPVDTKACLDDDVLPDGTRVGKGWFLSYHTYAMGRMESVWGKDCTEFKPERWLENGAYEGESPFRFPVFHAGPRMCLGKEMAYIQMKSIAASVMESFEIEALDKDTCPEHVLSLTLRIKGGLPVRVRVRDARIMGT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1616 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Ssu4g1616 502 SUPERFAMILY Cytochrome P450 32 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PANTHER CYTOCHROME P450 94B3-LIKE 12 493 - -
Ssu4g1616 502 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 Pfam Cytochrome P450 36 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1616 502 PANTHER CYTOCHROME P450 12 493 - -
Ssu4g1616 502 Gene3D Cytochrome P450 17 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1616 Ssu-Chr4 27913786 27915294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1616 8 495 Cytochrome P450 AT3G56630 59.394 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1616 - - gmx:100812147 840.491