Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1615 ATGGAGTTCCTCTCGTTCCTCTTCCTCGCACTTCTCTTCCTCTATCTCTGCGTTCAATTCCTCGCTAGAGTAAAACCCCGCAACAGCAAAGGCTTCAAAGCCTACCCTCTAGTCGGAACCTTACCAGACTTCTTGCAAAACCGCCACCGGTTCCTGGAATGGAGCACCCAAGTCCTCCGCGACTGCCCCACCAACACCGCCGTTATCTCTCGCCCCTACAAGCGCTACGGCGTCATAACGGCCAACCCCGACAACGTGGAACACATGCTCAAGACAAGATTTGACAACTACCCCAAGGGTGAACGCTTCGTCAACCTCCTCCAAGACTTACTCGGCAAGGGAATCTTCAACTCCGACGGCGACATTTGGAAAGTTCAGCGAAAAATCGCGAGCTACGAGTTCAGCACCAAATCACTCAGAAACTTCGTCGTCGACGCCTTCACCGTCGAACTACAAACAAGGCTGCTTCCAATTTTATCCAAAGCCTCGGAGTCAAACAGGGTTCTCGATTTGCAGGACCTGTTGGAGCGGTTCGCGTTCGACACCGTGTGCAAGCTAGCGTTCAACGTGGACCCGGCGTGTCTCGGCGGCGACGGCACCGCCGGCGCCGAGTTCATGCGCGCGTTCGAGGACGCCACCGTGCTGAGTTCGGGGAGGTTCATGAGCGTGTTTCCCTTTGTGTGGAAAACAAAGAAGCTGTTCAACGTTGGATCAGAACGGAGGCTCAGAAAATCAATCGCCACCGTTCACGAGTTCGCTGACACGATCATACGGTCCAGATTGGATTCCAAGGACCGCACCGGGGACCAAGATTTACTGTCGCGGTTCATCAGAACAGAGGATAGTTCCCCAGAGTTTCTCCGCGACATTGTCACAAGTTTCATCCTCGCGGGACGTGATACGACGTCGTCCGCGCTGAGCTGGTTCTTCTGGATATTGTCTTCCAGACCGGACGTGTGGAGAAAAATTCGCGACGAAATCGAAGGGGTTCGGTCGGCCACGCGCGGTGTTAGCGAGTTTGGGTACGAGGAGCTGAAGGAGATGCATTACTTGCACGCGGCGATTTCGGAGACGATGAGGTTGTACCCGCCCGTGCCCGTTGACGCGAAGGCGTGCCTGAACGACGACGTTTTGCCAGATGGAACGAGAGTTGGGAAGGGATGGTTCGTATCGTACCATACGTACGCAATGGGGAGAATGGAGAGCGTGTGGGGGAAAGACTGTACCGAATTTAAGCCCGAAAGGTGGTTGGAGAATGGGGCTTACCGAGGGGAGAGTCCGTTTCGGTTTCCGGTGTTTCATGCAGGTCCACGAACGTGTTTGGGGAAAGAGATGGCTTATATTCAGATGAAGTCGATCGCGGCTTCGGTAATGGAGAGCTTTGAGATCAAGGCACTGGATAAGGACACGTGTCCGGAGCACGTTTTGTCTTTGACGTTGAGGATCAAAGGAGGGTTGCCAGTGAGGGTATGGGTAAGGGATGGTAGTGTACGCAACGTAAGCAAGCGCACGTGCAGTAAGACAAGGCTCTATGGCAAAGACTTTCCTCTCCACCACTGCATGGGAGGTCCCCTAGTGCATCACCCTCAAGCAGCTAGCTCCACTCACCTTTAA 1614 0.5421 MEFLSFLFLALLFLYLCVQFLARVKPRNSKGFKAYPLVGTLPDFLQNRHRFLEWSTQVLRDCPTNTAVISRPYKRYGVITANPDNVEHMLKTRFDNYPKGERFVNLLQDLLGKGIFNSDGDIWKVQRKIASYEFSTKSLRNFVVDAFTVELQTRLLPILSKASESNRVLDLQDLLERFAFDTVCKLAFNVDPACLGGDGTAGAEFMRAFEDATVLSSGRFMSVFPFVWKTKKLFNVGSERRLRKSIATVHEFADTIIRSRLDSKDRTGDQDLLSRFIRTEDSSPEFLRDIVTSFILAGRDTTSSALSWFFWILSSRPDVWRKIRDEIEGVRSATRGVSEFGYEELKEMHYLHAAISETMRLYPPVPVDAKACLNDDVLPDGTRVGKGWFVSYHTYAMGRMESVWGKDCTEFKPERWLENGAYRGESPFRFPVFHAGPRTCLGKEMAYIQMKSIAASVMESFEIKALDKDTCPEHVLSLTLRIKGGLPVRVWVRDGSVRNVSKRTCSKTRLYGKDFPLHHCMGGPLVHHPQAASSTHL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1615 537 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 Pfam Cytochrome P450 31 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 PANTHER CYTOCHROME P450 12 490 - -
Ssu4g1615 537 SUPERFAMILY Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 Gene3D Cytochrome P450 13 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g1615 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Ssu4g1615 537 PANTHER CYTOCHROME P450 94B3-LIKE 12 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1615 Ssu-Chr4 27871203 27872816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1615 6 493 Cytochrome P450 AT3G56630 58.788 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1615 - - gmx:100812147 825.854