Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1610 ATGACCGAGTCAATGCACGCCGCGGAACCGTCGCCGGTGGCGGAGATTCCGGCATCCGAGCTCGTTTTCGACGACTTCTCCGCCGAGTTCGACAGCCTCCCCATCCCGTCCATGGACTCGTTCTTCACCAGCGACGCGCTTCCCTTCGCCTCCGATCTGGAATTCGGCTCGTGCTTCGACGACGCCGGCGAATTCGAGATCACCTTCGACGACCTGGACAACATCTGCATCCCCTCCGACGCCGAGGATTTCCTCCTCCCCGACAACATTTGTAACCCTAACGCCACAACCGGTGATTCTCCCGCGAAGAATTCCGATTCGCCGCATTCCGACGCATCCGCGGTCTCCGGCGACCAAAGCCCTAGCGTTTCTAGGTTTTTCAATTCGCAAGCGTCGGAGTCGGGCAAACAGGGTTCGCACGACGCGGTTGATCTTAAGGTTTCGTCGCCGGAGTACGAGTTTTGCGAACGGGAGGAGTCTTCTAACGGCCCGGTTTCGTCGCAGGGTTCGGGCAACGGTGGATCGGGTGTGTACGAGGCCATGAACTCGCCCTCACCTGATTCTGGCCCTTACGAGAGGGACATAACATCGTCGCATGCACATGTAGTTACAGATAATGGTGTGAAATTGGAGGAGATTCCAGGTATTGATctgaagaggaagaaagagtGTTGTGAAGGAAGTGCTACCAAGTACAGAAGGTTCTCTTCCTCTGTGGAGAACAAGAGTGAGAAACAGTCTCAGTCCGATGTGGATgcaattgatgatgatgaggagaAAAGGCAGGCTAGGTTGATGAGGAACAGGGAGAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTATGTGGAGGAACTTGAGGAGAAAGTGAGATCAATGAATTCCATCATTGCTGATTTGAGTAGTAAGATTTCATATGTGGTGGCTGAGAATGCTACACTTAGACAGCAAATGGGTGCTGGTGTGATGTGTGCTCCGCCTCCACCTGCTCCTGGGATGTACCCTCATCCTCCAATGGCACCCATGCCTTATCCTTGGATGCCATGTGCTCCCTATGTTGTTAAGCCTCAAGGGTCTCAGGTTCCCTTGGTGCCCATTCCTAGGTTGAAGCCTCAGCAACCTGCTGCTGCTGCAGCTTCCAAGGGTAAGAAGTCTGAGAGTAAGAAGAGTGAGGGGAAGACTAAGAAGGTTGCTAGTATTAGTTTGTTgggtttgtttttctttattgtgcTTTTTGGTGGGCTTGTTCCTCTGGTGGATTTTAAGTTTGGGGGTTTAGTGGACAGTGTTCCTGGTACTGGTAGGTCTGGCTATGTTAGTGATGGGGTGTGTGATCATGGTGGAGGAAGGTTTGGCCTTTGA 1362 0.5044 MTESMHAAEPSPVAEIPASELVFDDFSAEFDSLPIPSMDSFFTSDALPFASDLEFGSCFDDAGEFEITFDDLDNICIPSDAEDFLLPDNICNPNATTGDSPAKNSDSPHSDASAVSGDQSPSVSRFFNSQASESGKQGSHDAVDLKVSSPEYEFCEREESSNGPVSSQGSGNGGSGVYEAMNSPSPDSGPYERDITSSHAHVVTDNGVKLEEIPGIDLKRKKECCEGSATKYRRFSSSVENKSEKQSQSDVDAIDDDEEKRQARLMRNRESAQLSRQRKKHYVEELEEKVRSMNSIIADLSSKISYVVAENATLRQQMGAGVMCAPPPPAPGMYPHPPMAPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQPAAAAASKGKKSESKKSEGKTKKVASISLLGLFFFIVLFGGLVPLVDFKFGGLVDSVPGTGRSGYVSDGVCDHGGGRFGL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1610 453 MobiDBLite consensus disorder prediction 237 258 - -
Ssu4g1610 453 Coils Coil 283 303 - -
Ssu4g1610 453 MobiDBLite consensus disorder prediction 233 258 - -
Ssu4g1610 453 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 11 444 - -
Ssu4g1610 453 CDD bZIP_HY5-like 261 312 - -
Ssu4g1610 453 MobiDBLite consensus disorder prediction 160 182 - -
Ssu4g1610 453 MobiDBLite consensus disorder prediction 372 393 - -
Ssu4g1610 453 SUPERFAMILY Leucine zipper domain 260 318 IPR046347 GO:0003700|GO:0006355
Ssu4g1610 453 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 11 444 - -
Ssu4g1610 453 Pfam bZIP transcription factor 258 317 IPR004827 GO:0003700|GO:0006355
Ssu4g1610 453 MobiDBLite consensus disorder prediction 95 208 - -
Ssu4g1610 453 SMART brlzneu 256 320 IPR004827 GO:0003700|GO:0006355
Ssu4g1610 453 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 318 IPR004827 GO:0003700|GO:0006355
Ssu4g1610 453 MobiDBLite consensus disorder prediction 95 137 - -
Ssu4g1610 453 Gene3D - 258 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1610 28 443 bZIP Transcription Factor Family AT2G40950 44.495 8.67e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu4g1610 bZIP_1 2.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1610 K25783 - gmx:100101871 550.821