Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1576 ATGAATCCAAAAAGGGTACCCCAAGAGAAGGTGACAGAGGCGAATTATTGTGACTGGATAGATAGTTTTGAAGAAACTGTTGGGATTGAGACCCCTACGGTGAAAGAAACTGAGATGCTTGTGGCCATTGATGATGGCTGGTTCTTCCTCCTCGGTGGTATTCTCTTGCCTCTGCACCTCAACCAAGAAACTTTGGAGGTGAGAGGCTGTCATCAGGCCATTCTCATCGAAATAACGGTCAAAAATAGGGAGCTTGAAGCCCTGGTGGAAGCAAAAGCAAACGCTGTATTAATTGGGACAGCCTTTGCATTGAACATGCTCTTCAACATACCTGTTTGGGCTGGTGTTCTTTTGACAGGGCTCAGTACATTGATCCTCATAGCATTACAGCAATATGGGGTAGTTTTCTGTATTCTATACAGCCCTCATCCCCATGTTTACTTGGCACTGAAGCACTCAAGAGTCATGTCAGAAATCTCAAGCTGTTTGTTGAGGAAATTTGGGTTCTACAGTCATTGCAAGAGATACTAg 531 0.4426 MNPKRVPQEKVTEANYCDWIDSFEETVGIETPTVKETEMLVAIDDGWFFLLGGILLPLHLNQETLEVRGCHQAILIEITVKNRELEALVEAKANAVLIGTAFALNMLFNIPVWAGVLLTGLSTLILIALQQYGVVFCILYSPHPHVYLALKHSRVMSEISSCLLRKFGFYSHCKRY 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1576 176 PANTHER METAL TRANSPORTER NRAMP1 93 134 - -
Ssu4g1576 176 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 93 134 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1576 Ssu-Chr4 27032837 27039141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1576 97 134 Inorganic Solute Cotransporters AT1G15960 89.474 9.37e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1576 K21398 - bvg:104904879 74.3294