Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1451 ATGGAAGAGTTTTCCTCTCTGCTTGAAGGTCAAACAAACATGGAATCAACCATGTTGGCCACTCAAGAAGTCGTGTCAAGGGATTGGACTCAAGAGTTAGTGATACCCCAACACCTAATGACTCCACAGATTGGAAGTTCTTCTCAAGGCTCGGTCAACAATTTGACCAATTATTCAACCCAGCAATGTGATGTCCAATCCGTGTTAGAAGAAATACTAGACGAAAGACATATAGAAGAAAGTCTAATCCGATCCAAGTTATTGTCGTACCAACTTGGACCCTGTGCAACGTACATGTCATCTATGGTGAGGTGCTATTGGAGAGAATTGGACGAAATGCAAAGCACGAGCAAAAGTGATTATATTCATGCCGTTAGAAGGAGGGGCAAGGGCTTCACTGACAGCGACTCCCCTTTCCGTGGCGTCTACAGAAACAGGGTCCCGGATAGCAGGAAATGGGAGGCGAGGCTGGGTCGTGAGGGGTTGCCAACCATAAACTTGGGAACTTATTACACTGCGGAGGATGCAGCCAGGGCTTATGATATTGTATCAATAAAACTGAAGGGATGGGATGCAATTACCAACTTTGATTGGAATGGCTATGAAGTGGAGGGCATTATGGAGAGTGTAATAGCACAAGCAATGGATGGATCAGTTATTTTGCAAAAAGAAGGCACCAATAATGAAACTGAAGCATATCCTCAAAGCAACTCCCGAGTCCAACGCAATCCTCAACAACTCAGAAACTCCCTAGTCCAACACAATCCTCAACAACCCAGCAACTCCATTGGCCAACACAATCCTCAACAACTGAGCAACTCGTCCTTTTCTCATGGCTGCCAAAACCCCAGTCTCGTTCCAAGGAACCCTTATAATACTCTTGGTGGAGTTACTGGTGGAGCTAGAAATAGTGGCAATTCAATTGGTAACCAAACTAAGCATGGAGGAGCGTTTTCAAATCAGACTGCTACACTGCAACAGTCACTTCAGACTCACAGCCAAGTGAATGTTAACAATAATTTCAACAATCAGAACCTTCTCAACAATAACAACCAGTTTCTGTCTCAGAGTTCTAACCTTCCTCTACTTGCTCACGGCACCCAAAATCTTGAGTTGAAAAAGTGTCTCCGTTTCCCAGATTGGCCATCTGGTTTTGGAACAAAGTTACTAGGGGTAGGGGGGAACATGGAATTGGAACCCTTGAGCAATATACCTGCCCTGAATGAGCAATCTCTAACACATGGCATGGTGAGTCAAAGTGCAGGAGCAACAAATGGTGTTTGTTCATTTGGGTCAGAGATTCAACCAGTGGCACCATCTAATCAGGAATGTGGAGCAACACAGCTACAGTTACCTGAACTGAACCAAAGTTATGAGCCTTACAACAACAATGCCAATACTTTGAACCAGAAACAACATCAGAACTTAAACTCCTGCTCCTCTGGTGGTTTTCAGATTCCTAGTTCTGAAGCAAACAATAATGGTTCCCAAAGTCAGACCAGTGGCAGTCAAATTGATTTGGACATGAGAAATTATCTCAACAGATCTTACATAGAAGATGATGATTTCGCCTGTGATTTTGACTTGTTTTCAGCAATGAATGGGGGTAGACAAAGCCTCTAG 1623 0.4387 MEEFSSLLEGQTNMESTMLATQEVVSRDWTQELVIPQHLMTPQIGSSSQGSVNNLTNYSTQQCDVQSVLEEILDERHIEESLIRSKLLSYQLGPCATYMSSMVRCYWRELDEMQSTSKSDYIHAVRRRGKGFTDSDSPFRGVYRNRVPDSRKWEARLGREGLPTINLGTYYTAEDAARAYDIVSIKLKGWDAITNFDWNGYEVEGIMESVIAQAMDGSVILQKEGTNNETEAYPQSNSRVQRNPQQLRNSLVQHNPQQPSNSIGQHNPQQLSNSSFSHGCQNPSLVPRNPYNTLGGVTGGARNSGNSIGNQTKHGGAFSNQTATLQQSLQTHSQVNVNNNFNNQNLLNNNNQFLSQSSNLPLLAHGTQNLELKKCLRFPDWPSGFGTKLLGVGGNMELEPLSNIPALNEQSLTHGMVSQSAGATNGVCSFGSEIQPVAPSNQECGATQLQLPELNQSYEPYNNNANTLNQKQHQNLNSCSSGGFQIPSSEANNNGSQSQTSGSQIDLDMRNYLNRSYIEDDDFACDFDLFSAMNGGRQSL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1451 540 ProSiteProfiles AP2/ERF domain profile. 138 197 IPR001471 GO:0003700|GO:0006355
Ssu4g1451 540 MobiDBLite consensus disorder prediction 479 504 - -
Ssu4g1451 540 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 101 314 - -
Ssu4g1451 540 Gene3D AP2/ERF domain 138 198 IPR036955 GO:0003700|GO:0006355
Ssu4g1451 540 CDD AP2 139 199 IPR001471 GO:0003700|GO:0006355
Ssu4g1451 540 SMART rav1_2 138 203 IPR001471 GO:0003700|GO:0006355
Ssu4g1451 540 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL7 101 314 - -
Ssu4g1451 540 MobiDBLite consensus disorder prediction 252 317 - -
Ssu4g1451 540 SUPERFAMILY DNA-binding domain 138 198 IPR016177 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1451 103 225 AP2-EREBP Transcription Factor Family AT3G20840 37.903 5.23e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1451 - K09285 pvu:PHAVU_001G137500g 363.614