Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu4g1426 | ATGGCAGGGACTGGTTTCTCCACCTCCTGTCTTTCCTCTTCCAGCAACTTAGGGACATGTTGGTTGGTATTAAAATCTCACAATGCAAGGGCCGTGCCAGGGAAACTACCTGGAAGTGGAAGGAGAAGATTGTCAATAAAAGCAGAAGTGAAGTATGTAAACGCTGAAAAAGCGAAGGAACTTGTGGAAGTGGATGGATATACGGTTCTTGATGTGCGGGACAAAACTCAGTTTGAGCGAGCTCACATACAATCTTGTTCCCATGTGCCtctttttgttgaaaataaagaCAATGATCCCGGTACTATTATAAAAAGGACTCTGCACAATAATTTTTCTGGGTTGTTCTTTGGGTTACCATTCACTAAGCCAAATCCTGATTTTGTGCAATCTGTTAAGAGCCAGTTTCCGCCTGAAAGTAAACTCTTGATTGTATGTCAGGAAGGACTGAGGTCTGCTGCAGCAGCAAATAAGTTAGAGGAAGCTGGTTACGTAAATGTAGCATGCATCACATCTGGTCTACAAACTGTAAAACCAGGGACATTTGATTCTGTTGGCTCCACGGAGTTGGAGAATGCCGGCAAAGCTGGTTTGGTGACAATCCAAGGAAAAATTTCAACAGTGTTGGGAACTATTCTTATttGTGCATATTTATTCATTACCTTCTTCCCTGAGCAAGCAGAGAAGCTATTCCAATTGGCCCCTGCAGGCTAA | 714 | 0.423 | MAGTGFSTSCLSSSSNLGTCWLVLKSHNARAVPGKLPGSGRRRLSIKAEVKYVNAEKAKELVEVDGYTVLDVRDKTQFERAHIQSCSHVPLFVENKDNDPGTIIKRTLHNNFSGLFFGLPFTKPNPDFVQSVKSQFPPESKLLIVCQEGLRSAAAANKLEEAGYVNVACITSGLQTVKPGTFDSVGSTELENAGKAGLVTIQGKISTVLGTILICAYLFITFFPEQAEKLFQLAPAG | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu4g1426 | 237 | ProSiteProfiles | Rhodanese domain profile. | 63 | 186 | IPR001763 | - | |
| Ssu4g1426 | 237 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 48 | 175 | IPR036873 | - | |
| Ssu4g1426 | 237 | SMART | rhod_4 | 53 | 183 | IPR001763 | - | |
| Ssu4g1426 | 237 | PANTHER | RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC | 1 | 236 | IPR044615 | - | |
| Ssu4g1426 | 237 | Pfam | Rhodanese-like domain | 55 | 175 | IPR001763 | - | |
| Ssu4g1426 | 237 | Gene3D | - | 41 | 182 | IPR036873 | - | |
| Ssu4g1426 | 237 | CDD | RHOD | 58 | 178 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu4g1426 | Ssu-Chr4 | 23756535 | 23759892 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ssu4g1426 | 7 | 231 | Sulfurtransferasese or Rhodanese | AT2G42220 | 68.889 | 8.53e-114 | 323 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu4g1426 | - | - | gsj:114398290 | 427.943 |