Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1401 ATGGCCTTAGCTGGAAATGATGGTCCAACCATGGGAACGGTAACAAATACTGCACCATGGATTGTAACAATAGCAGCTAGTGACATTGAAAGGGCTTTTAAGAGCACTGTACGGTTGGGCAATGGCAAGAATGTTTCTCCTGATGTTGCAGCTCCTGGCATTGACATCTTGACATCTAATACTTTTAGGAAGTCACTCACCGGTTTGAAAGGAGACACTCAATTTTCAGAATTTATTCTATTGTCTGGGTCCTCTGGGACTTCCATGGCATGTCTTCTTGTTGCTGGAGTAGCACCACATGTGAAGTCATTTTACCCATATTGGACTCCTGCTGCAATCAGGTCTACTACTATTACCGCAGTTCTCTCTTGA 372 0.4382 MALAGNDGPTMGTVTNTAPWIVTIAASDIERAFKSTVRLGNGKNVSPDVAAPGIDILTSNTFRKSLTGLKGDTQFSEFILLSGSSGTSMACLLVAGVAPHVKSFYPYWTPAAIRSTTITAVLS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1401 123 Gene3D - 30 44 - -
Ssu4g1401 123 Pfam Subtilase family 4 120 IPR000209 GO:0006508|GO:0008236
Ssu4g1401 123 SUPERFAMILY Subtilisin-like 4 119 IPR036852 GO:0004252|GO:0006508
Ssu4g1401 123 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 2 44 - -
Ssu4g1401 123 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 46 120 - -
Ssu4g1401 123 ProSiteProfiles Serine proteases, subtilase domain profile. 1 123 - -
Ssu4g1401 123 Gene3D Peptidase S8/S53 domain 45 119 IPR036852 GO:0004252|GO:0006508
Ssu4g1401 123 Gene3D Peptidase S8/S53 domain 3 29 IPR036852 GO:0004252|GO:0006508
Ssu4g1401 123 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 44 IPR045051 -
Ssu4g1401 123 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 46 120 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1401 Ssu-Chr4 23319100 23320573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1401 1 46 Subtilisin-like Serine Gene Family AT4G00230 65.217 3.62e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1401 - - gmx:100795950 111.309