Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1373 ATGGCAGGGGACAGTTCTGGCGGGAACATTGTTCATCATGTGGCAGTGAGGGCCGCGGAGGAGGAAATTGAGGTGCTGGGGAATATTCTTCTTCACCCTTTGTTTGGTGGGGAGAAGAGGACGGAATCAGAGTTGAGATTGGATGAGAAATACTTCGTGAGGCTGAAGGATCGGGATTGGTATTGGAGGGCCTTTCTCCCCGAAGGAGAGGATAGAGACCATCCTGCTTGCAACCCGTTTGGGCCGAGAGGGAAAAGCCTTGCGGGACTCAAGTTCCCGAAGAGCCTTGTTTGCGTGGCCGGTTTGGATCTTCTGCAGGACTGGCAATTGGCATATGCAAAAGGACTTGAGGATTCTGGCCAACAGGTCAAACTCCTTTACCTCAAGGAAGCCACTATTGGCTTCTACTTCATGCCGAATAACGATCATTTTTATTGCCTAATGACGGAAATCAACAACTTCGTGAACTCTAACTGTTAA 480 0.4958 MAGDSSGGNIVHHVAVRAAEEEIEVLGNILLHPLFGGEKRTESELRLDEKYFVRLKDRDWYWRAFLPEGEDRDHPACNPFGPRGKSLAGLKFPKSLVCVAGLDLLQDWQLAYAKGLEDSGQQVKLLYLKEATIGFYFMPNNDHFYCLMTEINNFVNSNC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1373 159 Gene3D alpha/beta hydrolase 1 157 IPR029058 -
Ssu4g1373 159 PANTHER ARYLACETAMIDE DEACETYLASE 1 156 - -
Ssu4g1373 159 SUPERFAMILY alpha/beta-Hydrolases 2 156 IPR029058 -
Ssu4g1373 159 Pfam alpha/beta hydrolase fold 1 136 IPR013094 GO:0016787
Ssu4g1373 159 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1373 Ssu-Chr4 22663051 22663530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1373 1 157 Carbohydrate Esterase AT3G63010 74.522 9.60e-89 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1373 K14493 - gmx:100788435 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1373 4 22663051 22663530 Ssu7g2058 7 40786039 40787811 PCT