Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu4g1368 | ATGAAGGACAAGGTGGATTCCCCTGTTGGTGTTCTTGAGGACTATCTCAAGAGCTCAGAATCAGAAACAAGTTCTTCCAAAGAACCCAGTACGGATTCTGAGTCTCAGGATAAGTCAAAACCCGGTTCTAGGTGGCATGCGTTTCTTCAATTGTTGAGGATCAAATCGAAGAAGCCAATAGCCACATTGCATCCCCTCAGTGTCCTCAAGCTCTCGAGAAGAATGAGCAGTAGCATGAGGGAGAATATAATAGATGCAGATTCGTCCTTCAACAGGTCAACCTGGAAGATCTTCACTCACCATGAGATACAAATTGCAACCAATTACTTCGCCCAAGAAAATTTTGTTGGAAAGGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTGCCAAATGGTCAACTAGTGGCGATTAAACGGCTAACACGAGGAACAGAAAATGAAAGTATAGGGGACTTCTTATCAGAACTTGGCATAATGGCTCATGTAAACCACCCCAATACTGCTAAGTTAGTGGGCTATGGGGTGGAGGGAGGAATGCATTTAGTGCTTGAGTTGTCTGAAAAAGGGTGCTTAGCTTCGGTGCTTAATGGTTCCAAGGAGAAACTACCGTGGTCTATTAGGCAGAAAATAGCATTAGGAACAGCTAAGGGCATATTGTATCTTCATGAAGGTTGTCAAAGAAGAATTATCCACAGAGATATAAAAGCCGCGAATATCTTGCTTACTGAAGACTCTGAGCCGCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAGAATTGGACCCATCACACCGTTTCAAAAATTGAAGGGACTTTCGGTTACCTCGCTCCTGAATACTTGCTTCATGGGATAGTGGATGAGAAAACAGATGTATATGCCTTTGGTGTGGTGCTATTAGAATTAGTCACCGGGCGGCGAGCACTTGATTATTCACAGCAAAGCCTTGTTTTGTGGGCAAAACCTTTGctgaaaaagaattatattaggGAGCTGATTGATCCTTCACTAGCCGATGACTTTGACTGTCGGCAGATTAAAGTTATGCTCTTGGCAGCTTCTTTATGCATTCAACAATCCTCTATTCGTCGTCCCTCTATGAAACAGGCACGTTCTCTtgttctttcaaaatttcaacaaaacAAAGGAAAGGGGAAGAACAACGGCTTGTTGCCGAATTCCTTGAGGATTATCTCTCTGTGCCTCAAGACTGTGTCATCGAATGCCACCACCGTTGCTTCCACCGTGCGCTCCGCCGGCGCCTCCGTCGCCGCTTCTATTTCCTCTTCTTCTGAGGATCACAAAGATCAGGTAACCTGGGCCGGTTTTGATATACTGGAGCTTGATCCATCTAACTTCAAACGCGTTCTTTTACTTGGTTATCTGAATGGATTTCAAGTTCTTGATGTGGAGGATGCCTCTGGCTTCAGTGAACTGGTCTCAAAGCGTGACAGTCCAGTTTCTTTTTTACAGATGCAGCCCTTCCCTGTAGGTTGTGATGGCCAGGAGGGATTCAGAAAGTCACACCCTTTACTGTTGGTTGTTTCTGGGGATGACACCAGCAATATAAACCAGAACAGTACCTGCTTGAGTGGATTAGGAAGGGATGGTAATGTTGAGACTCAACCTGGGAACAATGTCAACTCTTCAACAACTGTTCAGTTTTACTCCTTGAAGTCTCACTGTTATGTTCATGTTCTGAGGTTCCGATCCAACGTGTGTATGATCAGATGCAGTTCACGGATAGTAGCTGTTGGTCTTGCCACACAAATATACTGCTTTGATGCTGTGACTCTTGAGAATAAGTTCAGTGTTCTCACTTATCCTGTTCCTCAGTTAGCTGGACAAGGAACAGCTGGTGTTAATGTTGGTTATGGTCCAATGGCTGTGGGTCCAAGGTGGTTGGCATATGCTTCTAACAACCCCCTTCCCTCTAATCTAGGTTGCTTAAGCCCACAAAACTGCAGTGCTTCTCCGGGAATTAGTCCATCAACTTCTCCAAGCAGTGGTAGTTTAGTGGCTCGTTATGCAATGGAGTCCAGTAGACATTTGGCTGCTGGAATAATCAAGTACTGTCAAGAGCTACTTCCTGATGGTTCCTCTTCTCCTGTACCATCAAATTCGGGTGTGAAAGTCAATAGGGTTACAGGAATTGATGCAGATAATGCAGGAATGGTAGTCATTAAGGATTTTGTTTCCAGAATTATCATATCACAATTCAAAGCTCATACTAGTCCTATATCTGCACTATGTTTTGACCCTAGTGGGACCCTTCTGGTGACTGCATCAGTCTATGggaataacattaatatattccGGATAATGCCATCATTGACATGCAAGAGTTCAGGCATTCCAGGCTCCAACTGGAACTCTTCTCATGTACATCTTTATAAACTTCACCGTGGAATCACACCAGCTATGATTCAGGACATTTGTTTCAGTAATTTTAGTCAGTGGATTGCAATTGTCTCATCCAAGGGTACTTgtcatctttttgttttgtcaCCCTTTGGAGGTGATACTGGTTTTCGAATTATTAGTTCTCAGGGTGAAGAACCGTCCTTACTTCCAGTTTTTTCTTTGCCTTGGTGGTATACTCCAGCTTCCATTTCTTATCAGCAATCTATGCCTCCCCCAGCACCTGTTGTCCTTTCTGTGGCTAGCCGGATAAAATATAGTAGTTTTGGATGGCTTAATACTGTTCACAATTCTGCTGCGAATGTGACAGGAAAAGTTTTTGTGCCATCTGGTGCCATTGCTGCCATCTTTCATAATTCCTTATCCCACTCGCAACAGCTTGTTAACTCAAAGGCAAAACCCTTAGAGCATATATTGGTATATACACCTTCAGGTCATGTAGTTCAACATGAACTTCTGCCATCTGTTGGTTTAGAAACAAGTGATAGTGGTTTGAGAAACCAATTGCATATGCAGGAGGATGAGTTCAGAGTCAAAGTTGAACCTATTCAATGGTGGGATGTATGTAGAAGGTCAGAATGGCCAGAAAGAGGGGATCCTTGCTGCAATACCTTTGATAGACAAGGAGGTAGTGAGAGAGttcaagagaaaataggttatagtGACATccatggattggattttttggGTATAAGTGATGGGGCAGGGGAAAAGATGGTAAAATCTTCTGGTGGGAATATGCAGGAGAGGTTTCACTGGTATCTGTCTAATGCGGAGGTGCAAGTGAATTTTGGAAGGTTACCCATATGGCAAAAGTCTAAGatTTGTTTCTATACAATGAGTTGTGCGGGAGCTAGTTTCAGTGCTAGTAGGGAGTTTGAAATTGAAAAGGTCCCTGCCaatgaaattgaaataagaCGGAAGGAGTTGCTGCCTGTTTTTGACTATTTTCATAGCATCAGATCAAGCTGGAATGAGAgAGGCCTTGCTGGGGAAAgatatttaaacccttcatctCCTGTTCCCAATCAGGCTGATGACAAGGAAACTACTGATGTGACAGTTATTTGTCATTCAAAGCCAGCATCACTGAGTTCCACTGAAAGCTCTGATGGAGGTTCGTCAAGAAGAATTGAAAATCTGCTTGACTTGGATCAAGTTGCTTCTAGTTATCAAATACTTGGTGAGATATGCCTGGAAAGAATGGGAACAATCAATGTTGAGCCTTCTCTACAAAACCAGATTGTGATGGAAAGTTCATCTTGTCTGTCTGGAAACTCGAAACATGTTGATTTCAACGTTGACCATATTGGCAGTCCTATATTCCAAGGGAGAAATATAACCTCTGAAGGAAGAGATTCTACAGGTGTTGGGATTGGTGAGAACTCAGCATTGGTCCTAGAACATGCTTCAGACGAGACTGAATTTGTGGAAGTAGCCTCGTTAATGCAAAATGAAGGTGTTGGGATATCTTTCAAGGATGGCCACTGCAAAACAGAGGAGCATGATGGAAGTGACATGTTAACTGAAGTTGTAACTGATGATGTTGACAGCAGCAGTAGCCACCATGAAAGAGAGCAACTGGAGGAGGATGGGGAGAATGATGAAATGCTTGGTGGCATATTTGCCTTTTCTGAAGAAGGTTGA | 4071 | 0.4191 | MKDKVDSPVGVLEDYLKSSESETSSSKEPSTDSESQDKSKPGSRWHAFLQLLRIKSKKPIATLHPLSVLKLSRRMSSSMRENIIDADSSFNRSTWKIFTHHEIQIATNYFAQENFVGKGGYAEVYKGCLPNGQLVAIKRLTRGTENESIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMHLVLELSEKGCLASVLNGSKEKLPWSIRQKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEDSEPQICDFGLAKWLPENWTHHTVSKIEGTFGYLAPEYLLHGIVDEKTDVYAFGVVLLELVTGRRALDYSQQSLVLWAKPLLKKNYIRELIDPSLADDFDCRQIKVMLLAASLCIQQSSIRRPSMKQARSLVLSKFQQNKGKGKNNGLLPNSLRIISLCLKTVSSNATTVASTVRSAGASVAASISSSSEDHKDQVTWAGFDILELDPSNFKRVLLLGYLNGFQVLDVEDASGFSELVSKRDSPVSFLQMQPFPVGCDGQEGFRKSHPLLLVVSGDDTSNINQNSTCLSGLGRDGNVETQPGNNVNSSTTVQFYSLKSHCYVHVLRFRSNVCMIRCSSRIVAVGLATQIYCFDAVTLENKFSVLTYPVPQLAGQGTAGVNVGYGPMAVGPRWLAYASNNPLPSNLGCLSPQNCSASPGISPSTSPSSGSLVARYAMESSRHLAAGIIKYCQELLPDGSSSPVPSNSGVKVNRVTGIDADNAGMVVIKDFVSRIIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSLTCKSSGIPGSNWNSSHVHLYKLHRGITPAMIQDICFSNFSQWIAIVSSKGTCHLFVLSPFGGDTGFRIISSQGEEPSLLPVFSLPWWYTPASISYQQSMPPPAPVVLSVASRIKYSSFGWLNTVHNSAANVTGKVFVPSGAIAAIFHNSLSHSQQLVNSKAKPLEHILVYTPSGHVVQHELLPSVGLETSDSGLRNQLHMQEDEFRVKVEPIQWWDVCRRSEWPERGDPCCNTFDRQGGSERVQEKIGYSDIHGLDFLGISDGAGEKMVKSSGGNMQERFHWYLSNAEVQVNFGRLPIWQKSKICFYTMSCAGASFSASREFEIEKVPANEIEIRRKELLPVFDYFHSIRSSWNERGLAGERYLNPSSPVPNQADDKETTDVTVICHSKPASLSSTESSDGGSSRRIENLLDLDQVASSYQILGEICLERMGTINVEPSLQNQIVMESSSCLSGNSKHVDFNVDHIGSPIFQGRNITSEGRDSTGVGIGENSALVLEHASDETEFVEVASLMQNEGVGISFKDGHCKTEEHDGSDMLTEVVTDDVDSSSSHHEREQLEEDGENDEMLGGIFAFSEEG | 1356 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu4g1368 | 1356 | ProSiteProfiles | Protein kinase domain profile. | 110 | 363 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g1368 | 1356 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Ssu4g1368 | 1356 | ProSitePatterns | Protein kinases ATP-binding region signature. | 116 | 138 | IPR017441 | GO:0005524 | |
Ssu4g1368 | 1356 | Gene3D | Phosphorylase Kinase; domain 1 | 81 | 184 | - | - | |
Ssu4g1368 | 1356 | Pfam | Protein kinase domain | 112 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g1368 | 1356 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 229 | 241 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu4g1368 | 1356 | SUPERFAMILY | Protein kinase-like (PK-like) | 91 | 373 | IPR011009 | - | |
Ssu4g1368 | 1356 | Pfam | WD domain, G-beta repeat | 739 | 766 | IPR001680 | GO:0005515 | |
Ssu4g1368 | 1356 | SMART | WD40_4 | 792 | 835 | IPR001680 | GO:0005515 | |
Ssu4g1368 | 1356 | SMART | WD40_4 | 734 | 774 | IPR001680 | GO:0005515 | |
Ssu4g1368 | 1356 | Pfam | Breast carcinoma amplified sequence 3 | 881 | 1120 | IPR022175 | - | |
Ssu4g1368 | 1356 | MobiDBLite | consensus disorder prediction | 1321 | 1356 | - | - | |
Ssu4g1368 | 1356 | SUPERFAMILY | WD40 repeat-like | 549 | 834 | IPR036322 | GO:0005515 | |
Ssu4g1368 | 1356 | Gene3D | Transferase(Phosphotransferase) domain 1 | 187 | 390 | - | - | |
Ssu4g1368 | 1356 | SMART | serkin_6 | 110 | 377 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g1368 | 1356 | Gene3D | - | 669 | 855 | IPR015943 | GO:0005515 | |
Ssu4g1368 | 1356 | PANTHER | AUTOPHAGY-RELATED PROTEIN 18H | 382 | 1355 | - | - | |
Ssu4g1368 | 1356 | PANTHER | BREAST CARCINOMA AMPLIFIED SEQUENCE 3 | 382 | 1355 | IPR045142 | GO:0006914 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu4g1368 | Ssu-Chr4 | 22580949 | 22610076 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu4g1368 | 97 | 374 | Trihelix Transcription Factor Family | AT1G68690 | 40.418 | 4.26e-61 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Ssu4g1368 | BCAS3 | 1.7e-77 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu4g1368 | - | - | gmx:100785780 | 1684.46 |