Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1311 ATGACGACGATACGCAGGTTTTGCTGCAACGATCTTCTTCGCTTTGCCTCCGTCAATCTCGACCATCTCACCGAAACTTTTAACATGTCCTTCTACATGACCTATCTTGCACGATGGCCCGATTATTTCCACGTTGCCGAAGGCCCTGGTAACCGAATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAATCTTGGCATGGTCATGTGACTGCGGTAACTGTTGCTCCAGAGTATCGCAGGCAGCAGTTAGCCAAGAAACTTATGAATCTGCTGGAAGACATTAGTGACAATATTGACAAGGCTTACTTTGTTGATCTCTTTGTGAGAGCTTCAAATGCACCAGCCATCAAGATGTATGAGAAGCTTGGCTATGTGATTTATCGACGAGTGCTACGTTACTATTCTGGGGAAGAAGATGGTTTAGaTATGAGGAAGGCATTGTCTCGTGATGTTGAAAAGAAGTCCATCATCCCCCTTAAACGGCCAGTCACTCCTGATGAATTAGAGTTGTCAACTTGA 528 0.4508 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELELST 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1311 175 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016407
Ssu4g1311 175 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 172 - -
Ssu4g1311 175 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 172 - -
Ssu4g1311 175 Gene3D - 2 162 - -
Ssu4g1311 175 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Ssu4g1311 175 CDD NAT_SF 43 97 - -
Ssu4g1311 175 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu4g1311 Acetyltransf_1 8.3e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1311 K17972 - gmx:100306394 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1311 4 21427226 21445476 Ssu4g1311 4 21427226 21445476 ECH