Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1176 ATGGAATCCGAATCCAAATCCAAACCCAAAATTCAACTCTTTTTCCTCACCCTTTTCCTCTTCACTCTCACCATCCATGCAGAAACTCTTGGAACTTATATAGTTCAGCTACACCCTCATGGCACAACCAGCTCTGCCTTCACCTCCAAGCTCAAATGGCACCTTTCATTCATCCAACAAACCATTTCCTCTGACGAGGACCCTTCTTCGCGCCTTCTCTACTCTTACCGTTCGGCCATGGATGGTTTTGCAGCTCAGTTAACTGAGTCTGAGCTTGAGTACCTCAAAAACTTGCCTGATGTTATCTCCATTAGGCCTGACAGGAGGCTCCAGATTCAGACCACTTACTCTTACAAGTTCTTGGGACTGAACCCCGCTAAAGAAAATGGTTGGTACCAATCCGGTTTCGGCCGTGGAACCATAATTGGGGTGCTTGATACTGGAGTGTGGCCAGAGAGTCCTAGCTTCAATGATCGTGGAATGCCTCCAGTTCCCAAGAAATGGAAGGGTATATGCCAAGCTGGGAAGGCCTTTAACTCTTCCAATTGTAACCGAAAACTCATTGGTGCGAGGTACTTCACCAAAGGCCATCTTGCAGTGTCACCTTTTGGAATTCCAGAATATCTCTCTCCAAGAGACTCCTCTGGACATGGCACACACACTTCGTCCACTGCTGGAGGAGTGCCGGTGCCGATGGCAAGCGTGTTCGGTTACGCGGCCGGCGTGGCACGAGGAATTGCTCCCGGTGCCCACATTGCAGCGTACAAAGTGTGTTGGTACAATGGCTGCTATAACTCAGACATCATGGCTGCAATGGATGTGGCAATCAGAGATGGGGTGGACATTCTCTCCTTGTCTCTAGGTGGCTACTCTCTGCCTCTATATGATGATAATATTGCCATTGGAAGCTTCAGAGCAATGGAGCATGGGATTTCAGTTATATGTGCGGCAGGAAACAATGGCCCTACGGCAATGTCTGTTGCCAATGAGGCTCCTTGGATTGCCACTATTGGTGCAAGCACACTAGACAGGAAATTCCCAGCTATGGTTCGCATGGGAAATGGACAAGTTCTCTATGGAGAATCCATGTATCCACTGGACCATCCAATGAGCAATGGAAAACAAGTTGAGCTGGTTTATGTGACTGAAGGGGACACCGAGAGTCAATTTTGCCTCGGAGGGTCTCTTCCAAGGGACAAAGTTAAAGGCAAAATGGTGGTTTGCGATCGAGGGGTGAACGGAAGAGCAGAAAAGGGCCAAGTGGTGAAGGAGGCAGGTGGTGTTGCTATGATCCTCACAAACACGGAGATAAACTTGGGTGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACTTTGGTAGGGTTTGATGAATCGGTCACCTTGAAGGCTTACATAAACTCCACAGTGAGACCTCTTGCTCGGATTGAATTTGGAGGAACTGTGATAGGGAAGTTTAGAGCTCCAGCAGTGGCAAGATTTTCAGCTAGAGGACCGAGTTATACAAACCCTTCAATCCTCAAACCAGATGTTATAGCTCCGGGAGTCAACATCATTGCCGCATGGCCTCAGAACCTCGGTCCAACCGGCCTTCCGGAGGATTCTAGAAGAGTTAACTTCTCTGTCATGTCTGGTACCTCAATGGCATGCCCTCATGTTAGTGGAATTGCTGCTCTCATTCGCTCGGCTCATCCAAGATGGACCCCTGCAGCCATCAAATCTGCAATCATGACAACAGCCGAGGTAACTGACCACACCGGAAGGCCAATACTTGATGAAGACCAGCCAGCTGGAGTTTTTGACATGGGAGCTGGACACGTGAATCCACAAAGTGCATTGAACCCTGGATTGGTGTATGACATTAGGCCAGATGACTATATCATCCACCTTTGCAGCCTTGGATACACAAGTTCGGAAATATTCAGCATCACACACAGAAATGTGAGTTGCAATGCAATCATGCAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCATTCTCAGTTATTTTTAAGGATGGGCTGAGGAGAAAGATGTTCACCAGGAGACTAACAAATGTGGGAAGTCCCAACTCCATCTACTCGGTGGAGATTATGGCACCTGAAGGAGTAAAGGTGATAGTGAAGCCCAAGCGGCTGGTATTTAAACAAGTGAATCAAAGCTTGGGTTACAAGGTGTGGTTTATATCAAGAAAAAGCGTTAAAAAAGGTGATGGTTTGATGACCTATGCAGAAGGGCATTTGACATGGGTACACTCACAAAATGGTTCTTACAGGGTTAGAAGCCCGGTAGCAGTGACTTGGAAGTCAAAGTAG 2316 0.4758 MESESKSKPKIQLFFLTLFLFTLTIHAETLGTYIVQLHPHGTTSSAFTSKLKWHLSFIQQTISSDEDPSSRLLYSYRSAMDGFAAQLTESELEYLKNLPDVISIRPDRRLQIQTTYSYKFLGLNPAKENGWYQSGFGRGTIIGVLDTGVWPESPSFNDRGMPPVPKKWKGICQAGKAFNSSNCNRKLIGARYFTKGHLAVSPFGIPEYLSPRDSSGHGTHTSSTAGGVPVPMASVFGYAAGVARGIAPGAHIAAYKVCWYNGCYNSDIMAAMDVAIRDGVDILSLSLGGYSLPLYDDNIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTLDRKFPAMVRMGNGQVLYGESMYPLDHPMSNGKQVELVYVTEGDTESQFCLGGSLPRDKVKGKMVVCDRGVNGRAEKGQVVKEAGGVAMILTNTEINLGEDSVDVHVLPATLVGFDESVTLKAYINSTVRPLARIEFGGTVIGKFRAPAVARFSARGPSYTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMACPHVSGIAALIRSAHPRWTPAAIKSAIMTTAEVTDHTGRPILDEDQPAGVFDMGAGHVNPQSALNPGLVYDIRPDDYIIHLCSLGYTSSEIFSITHRNVSCNAIMQMNRGFSLNYPSFSVIFKDGLRRKMFTRRLTNVGSPNSIYSVEIMAPEGVKVIVKPKRLVFKQVNQSLGYKVWFISRKSVKKGDGLMTYAEGHLTWVHSQNGSYRVRSPVAVTWKSK 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1176 771 Gene3D Peptidase S8/S53 domain 139 626 IPR036852 GO:0004252|GO:0006508
Ssu4g1176 771 SUPERFAMILY Protease propeptides/inhibitors 54 112 - -
Ssu4g1176 771 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Ssu4g1176 771 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Ssu4g1176 771 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Ssu4g1176 771 SUPERFAMILY Subtilisin-like 113 617 IPR036852 GO:0004252|GO:0006508
Ssu4g1176 771 CDD PA_subtilisin_like 350 476 - -
Ssu4g1176 771 CDD Peptidases_S8_3 110 580 IPR034197 -
Ssu4g1176 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Ssu4g1176 771 Gene3D - 343 483 - -
Ssu4g1176 771 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Ssu4g1176 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 768 IPR045051 -
Ssu4g1176 771 SUPERFAMILY PA domain 354 492 IPR046450 -
Ssu4g1176 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 113 IPR037045 -
Ssu4g1176 771 Pfam Subtilase family 137 592 IPR000209 GO:0006508|GO:0008236
Ssu4g1176 771 Pfam PA domain 377 458 IPR003137 -
Ssu4g1176 771 Pfam Fibronectin type-III domain 662 766 IPR041469 -
Ssu4g1176 771 Gene3D - 630 768 - -
Ssu4g1176 771 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 27 768 - -
Ssu4g1176 771 ProSiteProfiles Serine proteases, subtilase domain profile. 115 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1176 Ssu-Chr4 18822695 18825010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1176 13 770 Subtilisin-like Serine Gene Family AT1G04110 66.883 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1176 - - gmx:100790205 1413.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1176 4 18822695 18825010 Ssu4g1176 4 18822695 18825010 ECH
Ssu4g1176 4 18822695 18825010 Ssu7g2263 7 44558475 44560235 PCT