Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1133 ATGCAGGAGGACATTTGCTATGCGGCAGAGGAAAAGAGAGTGACTATGATCATCTTGCCTTTTCACAAATGTTGGAGGATAGAAGTGGTTGAGGATAATGAGAACCATTGGGTGTTAGAGAATTTAGGCAACGAATGGAGGGTGGTGAACCGAAAGGTACTTAGGAATGCACCTTGCTCGGTGGCCGTGCTTGTGGACCATGGATATGGCAATCTGCGTCACACTCCAAGCCCAGATGCCACAATGGCCCAACAAGTGTGCATCATCTTCTTTGGTGGGCCTGATGATCGTGAGGCTCTAGAGTTGGGGAAGAAAATGCTTGAACACCCCACAGTTAAAATACGTGTTGTAAGGTTTCTTGAAAAGGATGGGTTGAATGGAAATAACATTGTGTTAAGCTTCTCACCCgacaaaaacaatgacaaaagtTATAGCTTCTCCACTGCTAAAATGAATCGTCAGGAGGAAAAGGTAAAGCTCTAA 483 0.4348 MQEDICYAAEEKRVTMIILPFHKCWRIEVVEDNENHWVLENLGNEWRVVNRKVLRNAPCSVAVLVDHGYGNLRHTPSPDATMAQQVCIIFFGGPDDREALELGKKMLEHPTVKIRVVRFLEKDGLNGNNIVLSFSPDKNNDKSYSFSTAKMNRQEEKVKL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1133 160 PANTHER CATION/H + ANTIPORTER 1 142 - -
Ssu4g1133 160 PANTHER BNAC06G14930D PROTEIN 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1133 Ssu-Chr4 18016789 18017271 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1133 1 157 Antiporter Super Family AT3G53720 48.503 4.14e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1133 - - gmx:100798644 236.498