Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1131 ATGCCGTTGAACATAACATCCATCCAGACATCCTCAAATGGAGTGTGGCAAGGTGACAACCCTTTGGACTATGCCTTCCCACTCCTAATAGTCCAAATCACCTTGGTCCTCGTCGTCAGCCGCTCCCTCGCTTTCCTCCTCAAACCTCTCCGACAACCCAAAGTCATTGCAGAGATTGTCGGTGGAGTGTTGCTGGGCCCATCAGCACTGGGGAGAAACAAAAGTTACTTGCACCGTATATTCCCTTCATGGAGCACGCCCACACTTGAATCTGTTGCCAGCATAGGccttcttttcttcctcttcctagTGGGTCTGGAGCTCGATCTCCACTCCATTCGCCGGAGCGGGCATAGAGCGTTCAGCATCGCCGCCGTGGGGATCTCTCTTCCTTTCGTCTCCGGCATCGGCGTCGCCGTCGTCCTCCGCAAAACCGTCGACGGCGCCGACGAGGCCGGCTTCGCGCAGTTCCTCGTCTTCATGGGGGTCGCGCTTTCCATCACGGCGTTCCCCGTGCTCGCGCGCATCCTAGCGGAGCTCAAGCTGCTCACCACGCGCGTGGGGGAGACCGCCATGGCCGCCGCCGCGTTCAACGACGTCGCCGCGTGGATCCTCCTGGCCCTCGCCGTGGCCCTCGCGGGCGACGGCGGCCGACACAAGAGCCCTCTGGTGTCGCTCTGGGTTCTGCTCTCCGGCCTCGCCTTCGTCGTCTTTATGGCGGTCGTTATCCGACCCGCGATGAGGGTTGTCGCTCGGAGGGCCGAAAACGCCGCCGTTGACGAGTTTTATGTTTGTTTGACGTTGGCGGCGGTGTTGGTGTCGGGGTTCGTCACCGACATGATCGGGATCCATTCTATATTTGGCGCGTTCGTGTTCGGGTTGACGGTTCCGAAGGATGGAAACTTTGCCAAGAGGTTGATGGAGAGGATCGAGGATTTTGTTTTGGGTTTGTTGCTGCCACTCTACTTTGCCTCCAGCGGGTTGAAGACGGACGTAACTACCATCCATGGCGGCGTGGCGTGGGGGCTTCTGTGTCTGGTCATATTCACGGCATGTGCTGGGAAGATTCTAGGCACTTTCGTGGTGGCCCTGTGTTGCAAGATACCCGTCAGGGAAGCGCTCACGCTTGGCGTGCTCATGAACACTAAAGGCCTCGTAGAGCTTATCGTACTCAACATTGGAAAGGAGAAAAAGGTTTTGAATGATGAAATGTTTGCTATCTTGGTACTTATGGCTCTATTCACCACCTTCATCACAACACCTATAGTGATGGCCATCTACAAACCAGCTCGTGGCATCACGGTCAAGACCCGTAGGAAGCTAGGAGACATTTCCTTCAGTTCCAGGAATGAAATGGTCGATGAGTTCCGAGTCTTGGCATGTATCCATGGGCCAGGCAATATCCCTTCTATCGTCAATTTCATTGAATCAACACGTAGCACCAACAAGTCCTTTCTAAAGTTGTTCATGCTGCACCTTGTTGAGCTCTCAGAGCGCTCATCCTCCATCATCACGGCTCAGCGCGCTCGTAAGAATGGTTTCCCTCTCTTCAACCGGTTCCATCGTGACGAGTGGCATGATCGACTCGCTGGAGCCTTTCAGGCCTACAGTCAACACGGCCAAGTCAAAGTCCGATCAACTACTGCTGTCTCTTCTCTCTCTACCATGCATGAGGACATTTGCCACGTGGCAGAGGAAAAGAGGGTGACCATGATCATCTTGCCCTTTCACAAACAGTGGAGGATAGAAGTGGGCGAGGATAACGAGAACCATCAGGTGTTAGAGAATTTGGGTCACGAATGGAGATTGGTGAACCAAAAGGTACTTAGGAATGCACCTTGCTCAGTGGCCGTGCTTATGGACCATGGATATGGCAATCTGCCTCACACTCCAAGTCCAAATACCACAGTGGTCCAACGAGTGTGCATCATCTTCTTCGGTGGGCCTGATGATCGAGAGGCTCTAGAGTTGGGGAATAAAATGCTTGAACACCCATCAGCTAAAGTATGCGTTGTAAGGTTTGTTGAAAAGGACAAGTTGAATGGAAATAACACTGTGTTAAGCTTTTCACCCGACAAAAATAGTGATAAATGTTACAGCTTCGCCACGGCTAAAATGAATCGTCAGAAAGAAAAGGAGTTGGATGAGAAGGTAATGGAAAAGTTTCAAAGCCAGTTGAATGAGATGGTCGAATATATTGAGAAGGTCAGTGACAACATTGTGGAAGAAGTATTAGTAATAGGGAAAAGTGGCGATTATGATCTTATAATAGTTGGGAAGGGTCGATATCCGTCAAATTCAGTGGCTAGATTGGCAGAAAGGCAAGTAGAGCACACTGAGTTAGGTCCTATTGGAGATATTTTAACATCATCAGAACATGAGGTGGTGTCATCAATACTGGTTATTCAACAACATGATGTAACGGTGGTAGATGATGCTCCTGTATGCAAGGTGCATCATGAGTACGACAAGATCAATGATAATGGTTCGTCCCACGGGGTAGGGATTTCAATAGCAAATGACAAtgtagtgtaa 2535 0.5049 MPLNITSIQTSSNGVWQGDNPLDYAFPLLIVQITLVLVVSRSLAFLLKPLRQPKVIAEIVGGVLLGPSALGRNKSYLHRIFPSWSTPTLESVASIGLLFFLFLVGLELDLHSIRRSGHRAFSIAAVGISLPFVSGIGVAVVLRKTVDGADEAGFAQFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVAAWILLALAVALAGDGGRHKSPLVSLWVLLSGLAFVVFMAVVIRPAMRVVARRAENAAVDEFYVCLTLAAVLVSGFVTDMIGIHSIFGAFVFGLTVPKDGNFAKRLMERIEDFVLGLLLPLYFASSGLKTDVTTIHGGVAWGLLCLVIFTACAGKILGTFVVALCCKIPVREALTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPIVMAIYKPARGITVKTRRKLGDISFSSRNEMVDEFRVLACIHGPGNIPSIVNFIESTRSTNKSFLKLFMLHLVELSERSSSIITAQRARKNGFPLFNRFHRDEWHDRLAGAFQAYSQHGQVKVRSTTAVSSLSTMHEDICHVAEEKRVTMIILPFHKQWRIEVGEDNENHQVLENLGHEWRLVNQKVLRNAPCSVAVLMDHGYGNLPHTPSPNTTVVQRVCIIFFGGPDDREALELGNKMLEHPSAKVCVVRFVEKDKLNGNNTVLSFSPDKNSDKCYSFATAKMNRQKEKELDEKVMEKFQSQLNEMVEYIEKVSDNIVEEVLVIGKSGDYDLIIVGKGRYPSNSVARLAERQVEHTELGPIGDILTSSEHEVVSSILVIQQHDVTVVDDAPVCKVHHEYDKINDNGSSHGVGISIANDNVV 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1131 844 Gene3D - 485 781 - -
Ssu4g1131 844 Pfam Sodium/hydrogen exchanger family 35 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu4g1131 844 PANTHER CATION/H + ANTIPORTER 3 819 - -
Ssu4g1131 844 Gene3D - 28 432 IPR038770 -
Ssu4g1131 844 PANTHER BNAC06G14930D PROTEIN 3 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1131 Ssu-Chr4 17999198 18005087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1131 75 832 Antiporter Super Family AT3G53720 64.858 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1131 - - gmx:100798644 1317.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1131 4 17999198 18005087 Ssu4g1131 4 17999198 18005087 ECH