Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1125 ATGATTTATCCTCTTGATAGGAAACCATCAAAACTTGGAGCTTTACTTCCAACTTTGACAGAGGTTGTGGCCAAAGAACACAAGAGGCTTCTAGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAAAGACAGCTTCTTGAAATGgaACGGGAAGAGGAGTCAAAGAGGCTAAGACTGCAGAAAATAACAGAAGAAGCAGAACAAAGACGGCTTGCCACTGAGTATGAGCAGAGGAAGAATCAGAGGATCCTTAGGGAGATAGAGGAGAGAGAAATTGAAGAAGCTCAAGCTTTACTCCAGGAAGCCGAAAAGCGTAttaaaaagaaggggaaaaagcCAATCATAGAGGGGGACAAAATTACCAAGCAGACCCTGATGGAGTTGACTTTAACTGAACAACTCCGGGAAAGAcaggaaatggaaaagaaactGCAGAAGTTAGCTAAAACCATGGATTATTTGGAAAGAGCAAAAAGAGAAGAAGCTGCTCCCCTGATTGAAGCTGCGTATCAACAGCGTCTAGTGGAAGAGAGAATTCTTCATGAGCACGAGCAACAGCAAGAGGTTGAACTGAGCAAACAGAGGCATGAGGGAGATCTCAAGGAGAAGGAGAGGCTTTCTCGAATGATAAGCTATAAGGAGATATATCAAGTGAGAGTTGTTAGCCACCGCCAAGCTGAGTTTAACAGATTGAGAAGAGAACGGGAGGAGCGAATCTCTAGGATTTTACTGTCCAGGAGacaggagagagaaaaaatgaggaAGTTGAAGTTTTATCTCAAGTTAGAAGAAGAGAGACAACAAAAATTGCGTGAGGAGGAGGAAGCTCAGAAACGtgaagAGACTGAAAGGAGAAAGAAGGAAGAGACTGAACGCTTAGCAAAATTGGCTGAGATAGCCGAAAAGCAGAGGCAAAGAGAGAGGGAACTTGAAGAGAAGGAGAGACAAAGGAGAGAAGCATTGTTGGGCAGATCTGCTGAACCAGCTCCTCCTTCCCGTCCATTGGAATCGGGATCTGCTGCTCCTGCTGCAGCAGCTCCAGCTCCAGCTCCAAACCCAGGGAAATACGTCCCTAAGTTCAGGCGAGAGAGAGCTGAAAGCACAGGAGCTCCTCCTCCTCCGGAAACAGACCGCTGGAGTAACAGTAGCAGCAGGCCAGATGGTGACAGGTGGCGTAGTGATGACAAGAGAACCTCGTTTGGTTCTGGTGGGGGTTCGAGGTCATCTACTTGGTCATCTTCCAGGAGTGCTCGCTGA 1266 0.4408 MIYPLDRKPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEREIEEAQALLQEAEKRIKKKGKKPIIEGDKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQQRLVEERILHEHEQQQEVELSKQRHEGDLKEKERLSRMISYKEIYQVRVVSHRQAEFNRLRREREERISRILLSRRQEREKMRKLKFYLKLEEERQQKLREEEEAQKREETERRKKEETERLAKLAEIAEKQRQRERELEEKERQRREALLGRSAEPAPPSRPLESGSAAPAAAAPAPAPNPGKYVPKFRRERAESTGAPPPPETDRWSNSSSRPDGDRWRSDDKRTSFGSGGGSRSSTWSSSRSAR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1125 421 Coils Coil 27 68 - -
Ssu4g1125 421 Coils Coil 81 115 - -
Ssu4g1125 421 MobiDBLite consensus disorder prediction 385 400 - -
Ssu4g1125 421 Coils Coil 262 322 - -
Ssu4g1125 421 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 370 - -
Ssu4g1125 421 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 370 IPR027512 GO:0005852
Ssu4g1125 421 Coils Coil 133 163 - -
Ssu4g1125 421 MobiDBLite consensus disorder prediction 402 421 - -
Ssu4g1125 421 MobiDBLite consensus disorder prediction 272 421 - -
Ssu4g1125 421 MobiDBLite consensus disorder prediction 272 325 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1125 1 418 Eukaryotic Initiation Factors Gene Family AT4G11420 60.579 4.01e-122 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1125 K03254 - gmx:100782598 496.123