Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1100 ATGGAAGAGGACTCTTCCTCTGCTGCTTATATCCGCCTGGTGCACCGTCTGATAGAGGAGTGTATCCTATTCAACATGAACAAAGAAGAATGCATGGAAGCTCTTTCCAAACATGCAAATATCAAGCCGGTTATCACCTCCACTGTTTGGAAGGAGTTAGAGAAGGAGAACAAGGAGTTCTTCGAGGCATACTCGAGGAGCAGAGCAGAGAGAGCTTCAGAGAGAGAGACAAAGCAAAGGATACAGAACATGGTTTCAGATTCTTCCAAAGAACGAGTTTAG 282 0.4504 MEEDSSSAAYIRLVHRLIEECILFNMNKEECMEALSKHANIKPVITSTVWKELEKENKEFFEAYSRSRAERASERETKQRIQNMVSDSSKERV 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1100 93 MobiDBLite consensus disorder prediction 70 93 - -
Ssu4g1100 93 Pfam Plant protein 1589 of unknown function (A_thal_3526) 14 65 IPR006476 -
Ssu4g1100 93 PANTHER OS02G0137100 PROTEIN 1 91 IPR006476 -
Ssu4g1100 93 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 11 65 IPR006476 -
Ssu4g1100 93 PANTHER ARGININOSUCCINATE LYASE 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1100 Ssu-Chr4 17510195 17511073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1100 - - gmx:100785268 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1100 4 17510195 17511073 Ssu7g2546 7 50088194 50092816 PCT