Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1072 ATGGCAGCTGCAGGTGTTAGGATTCCGCCCTTGACATCTACCTCCAACCCACCTCCCCTTTTCGATGGAACTACAAGGCTGTACATCAGTTATACATGCCCATATGCCCAACGAGTATGGATCGTTATGAATTATAagGGACTACAAGGCAAGATCCAACTGGTTCCTATCGATCTTCTGAACAGGCCTGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCGTTGGAGCACAATGGTAAGGTCTTGGGAGAAAGTCTTGATTTGATCAAGTATGTTGATGCCAACTTCGAAGGGCCATCTCTAGTTCCTAGTGACCCTGCAAAGAGAGAATTCGGGGAACAGTTGATATCTCACATCGATTCCTTCATGAAGGATATTTACGCTTCGTTCAAAGGAGATCCTGTACAGCAGGCTGgtgcTTCTTTTGATTATTTGGAGAATGCTCTCGGGAAATTTGAAGACGGACCCTTTTTTCTTGGCCAATTTAGTTTGGTGGATGCTGCCTTTGCTCCATTTGTTGAAAGGTTACAAATTACCTTTTCGGAGGTGTATAAGTATGACATCACATCTAGGAGGCCTAAACTAGCGACATATATTGAGGAGCTGAATAAAATTGATGCTTATAAGCCGACCAAGGTTGATCCCCAGGAGTTTGttgaagttttcaaaaaatggtTTTTGGTAAATgGCCCAGCTAAATGA 714 0.4188 MAAAGVRIPPLTSTSNPPPLFDGTTRLYISYTCPYAQRVWIVMNYKGLQGKIQLVPIDLLNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGPSLVPSDPAKREFGEQLISHIDSFMKDIYASFKGDPVQQAGASFDYLENALGKFEDGPFFLGQFSLVDAAFAPFVERLQITFSEVYKYDITSRRPKLATYIEELNKIDAYKPTKVDPQEFVEVFKKWFLVNGPAK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1072 237 SFLD Glutathione Transferase (cytosolic) 26 207 IPR040079 -
Ssu4g1072 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 232 IPR044629 GO:0004364
Ssu4g1072 237 Gene3D - 102 233 - -
Ssu4g1072 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 5 232 - -
Ssu4g1072 237 SUPERFAMILY GST C-terminal domain-like 100 230 IPR036282 -
Ssu4g1072 237 SFLD Main (cytGST) 26 207 - -
Ssu4g1072 237 CDD GST_C_Lambda 109 227 - -
Ssu4g1072 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 23 104 IPR004045 -
Ssu4g1072 237 SUPERFAMILY Thioredoxin-like 15 105 IPR036249 -
Ssu4g1072 237 Pfam Glutathione S-transferase, N-terminal domain 27 103 IPR004045 -
Ssu4g1072 237 Pfam Glutathione S-transferase, C-terminal domain 139 204 - -
Ssu4g1072 237 Gene3D Glutaredoxin 2 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1072 Ssu-Chr4 17063530 17065608 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1072 7 231 Glutathione S-transferase Gene Family AT5G02790 66.667 2.19e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1072 K00799 - gmx:100793025 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1072 4 17063530 17065608 Ssu4g1072 4 17063530 17065608 ECH