Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1071 ATGGCAACTGCCGGCGTGCATGAAGTTCGTGTTCCCCCGCTAACTTCCACCTCCGATCCACCTTCTCTCTTTGACGGAACCACCAgGTTGTACATCAGTTATGTTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTTCAAAACAGGCCTGCTTGGTATAAGGAGAAAGTCTATCCTGAAAACAAGGTGCCATCATTGGAGGACAATGGAAAGGTGTTGGGAGAAAGTCTCGATTTGATCAAATATGTAGATGAAAACTTCGAAGGGCCATCTCTAATTCCCAGTGTAAGAACTGCACATTCTCCCTCACACCCCACATCTCTATTTATTGTTTAG 384 0.4531 MATAGVHEVRVPPLTSTSDPPSLFDGTTRLYISYVCPYAQRVWITRNYKGLQDKIKLVPIDLQNRPAWYKEKVYPENKVPSLEDNGKVLGESLDLIKYVDENFEGPSLIPSVRTAHSPSHPTSLFIV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1071 127 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 3 113 - -
Ssu4g1071 127 Gene3D Glutaredoxin 1 104 - -
Ssu4g1071 127 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Ssu4g1071 127 SUPERFAMILY Thioredoxin-like 22 108 IPR036249 -
Ssu4g1071 127 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Ssu4g1071 127 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 113 IPR044629 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1071 Ssu-Chr4 17053156 17054224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1071 8 111 Glutathione S-transferase Gene Family AT5G02790 80.769 1.82e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1071 K00799 - gmx:100793025 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1071 4 17053156 17054224 Ssu7g2345 7 46054074 46063909 PCT