Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1070 ATGTTTTTTCAGGATCCTGCCAAGAAAGAGTTTGGTGAGCAGTTGATTTCCCATGTTGATACATTCACCAAAGAGCTGTATACTTCATTAAAAGGAGATCCAATACAACAAGCCAGTCCTGCCTTTGATTACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTTTTTCTTGGTCAATTTAGCTGGGTGGATATTGCCTATGTTCCATTTGTTGAAAGATTCCAGCTCGTCTTTTCTGAGGTGTTCAAGCATGATATAACAGAAGGAAGGCCTAAACTTGCAGCATGGATTGAGGAAGTGAACAAGATTAGTGCGTATACACAGACAAGAGCTGATCCTAAGGAAATCGTTGATATTTTCAAGAAACGTTTTTTGGCTCAACAGTGA 393 0.3944 MFFQDPAKKEFGEQLISHVDTFTKELYTSLKGDPIQQASPAFDYLENALGKFDDGPFFLGQFSWVDIAYVPFVERFQLVFSEVFKHDITEGRPKLAAWIEEVNKISAYTQTRADPKEIVDIFKKRFLAQQ 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1070 130 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 122 IPR010987 -
Ssu4g1070 130 SUPERFAMILY GST C-terminal domain-like 4 126 IPR036282 -
Ssu4g1070 130 Gene3D - 1 130 - -
Ssu4g1070 130 Pfam Glutathione S-transferase, C-terminal domain 36 100 - -
Ssu4g1070 130 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 129 IPR044629 GO:0004364
Ssu4g1070 130 PANTHER GLUTATHIONE S-TRANSFERASE TAU 2 129 - -
Ssu4g1070 130 CDD GST_C_Lambda 5 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1070 Ssu-Chr4 17052103 17053137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1070 1 127 Glutathione S-transferase Gene Family AT5G02790 62.992 3.35e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1070 K00799 - gmx:100793025 244.202