Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1037 ATGGCAGCGGGGTACGCATCCGGTTATTCTCTGCAACACACTCCAACATGGGCAATTGCCCTTGTTTCTTTCATTCTTATCTCAATCTCAATCATCTTGGAGCATCTCATTCATCTTATAATCAAATGGTTGAGGAAACATCGGAGGAGCGATTTGGTTGAAGCAATAGAGAGGCTTAAATCAGAGTTGATGATCTTAGGATTCATGTCGCTTTTGTTGACAGTAACTCAAGACGCTATAGTAGAAATCTGCATACCAGTAAGGGCTGCAGATACTATGCTTCCTTGTCGTAAACGTACTACCAATGATACAGCAATTTTGGATTCTTGCAGTGCCaaaaatGCCAATAAGGTTGCTTTAGTATCAAAACATGGAATCCATCAACTTCACATGTTCATTTTTGTTCTAGCTGTCATGCAAATTGTGTACAGTTTTCTCACCGTGTCTCTGGCAAGGGCTAAGATGAGGCACTGGAAAGCTTGGGATGAAGAGACTCAAACAATCGAATATGAAATTGCCAACGATCCTAGTAGATTCAGATTTACAAGGCAAACAACATTCGGAAGACGGCACATATCTACTAGTGTGGCATCACCAGTATATGTTTGGATTAAATGTTTTTTCAGGCAGTTCTTCCATTCAGTAGAAAAAGTTGATTATCTCACCCTGAGGCATGGTTTTATATCAGCTCACTTTTCAGCTAGGAACAGCAACTTCGATTTCCAAAAATACATTGAACAGTCGCTTGAGGAAGATTTCAGAATCATAGTGAGCATTAGCCCCGTGATGTGGTTCACAGTTGTTATTTTTCTGCTCGTGGACGTACATGGCTGGCATGTGTATCTCTGGTTATCCTATGTTCCCCTCTTGCTGGTTCTGATTGTGGGAGCTAAACTTGAAGTCATTGTCGACGAAATGGCTCTTCAAATGAAAGATGACAATAATGTAACCAAGGGGACCCCACTTGTTTGTCCAAGTGACAAGTTCTTCTGGTTTGGCCATCCAGGATTTGTGTTAACAATTCTACATTACACTTTATTTGTGAATGCATTCGAGCTTGCCTTCTTTACATGGGTATCAACACAGTTTGGAATAAATTCTTGCTACCACGAACACAGATCATTTACAATCATTAGGATGGTGATAGCGGTGGCAGTTCAAGTGCTATGTAGCTACGTTACTCTCCCCCTCTATGCGCTAGTGGCACAGATGGGTTCACAAGTGAAGAGCAAAGCGTTGGCTAAAATGCTGAGGCAGTGGCATGTTGAGGTGAGGGAGAGAAGGAAGAAGCAAGAACAGCTAATAAAGTCTTTTAGTTTTAAGCACACAAATCTGTCCTCAGAATGGAACCAAGGAAATAAGAGTGCCCCTGAGTTTTCTTCCACACCATGTGAAAGCATTCGTTCCACTGACGAAGGAGAAATTGTAGAAGAATTGGAGCATAAGGTGAAAAACAAGGGGAGCTCATCAAGTGACCCACCTAGTGTTGTCTAA 1494 0.417 MAAGYASGYSLQHTPTWAIALVSFILISISIILEHLIHLIIKWLRKHRRSDLVEAIERLKSELMILGFMSLLLTVTQDAIVEICIPVRAADTMLPCRKRTTNDTAILDSCSAKNANKVALVSKHGIHQLHMFIFVLAVMQIVYSFLTVSLARAKMRHWKAWDEETQTIEYEIANDPSRFRFTRQTTFGRRHISTSVASPVYVWIKCFFRQFFHSVEKVDYLTLRHGFISAHFSARNSNFDFQKYIEQSLEEDFRIIVSISPVMWFTVVIFLLVDVHGWHVYLWLSYVPLLLVLIVGAKLEVIVDEMALQMKDDNNVTKGTPLVCPSDKFFWFGHPGFVLTILHYTLFVNAFELAFFTWVSTQFGINSCYHEHRSFTIIRMVIAVAVQVLCSYVTLPLYALVAQMGSQVKSKALAKMLRQWHVEVRERRKKQEQLIKSFSFKHTNLSSEWNQGNKSAPEFSSTPCESIRSTDEGEIVEELEHKVKNKGSSSSDPPSVV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1037 497 PANTHER MLO-LIKE PROTEIN 1 2 105 IPR004326 GO:0006952|GO:0016021
Ssu4g1037 497 PANTHER MLO-LIKE PROTEIN 1 102 496 IPR004326 GO:0006952|GO:0016021
Ssu4g1037 497 PANTHER MLO-LIKE PROTEIN 2 105 - -
Ssu4g1037 497 MobiDBLite consensus disorder prediction 448 471 - -
Ssu4g1037 497 Coils Coil 496 497 - -
Ssu4g1037 497 MobiDBLite consensus disorder prediction 448 468 - -
Ssu4g1037 497 PANTHER MLO-LIKE PROTEIN 102 496 - -
Ssu4g1037 497 Pfam Mlo family 10 442 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1037 Ssu-Chr4 16652965 16661254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1037 10 429 MLO family AT3G45290 52.955 1.18e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1037 K08472 - gmx:100787201 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1037 4 16652965 16661254 Ssu7g1055 7 23110297 23115762 ECH
Ssu4g1037 4 16652965 16661254 Ssu4g1037 4 16652965 16661254 ECH
Ssu4g1037 4 16652965 16661254 Ssu8g0546 8 8822591 8851594 ECH
Ssu4g1037 4 16652965 16661254 Ssu3g2529 3 77851067 77861721 ECH