Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1014 ATGCAGCTGAATGCTTCTCAGATTAAAGTTCTTCAAGGTCAAGATGACGTGATTAGTTCCATGAAAGAAGCTGCATCCAAGGAACTTTTGAATGTGAGTCATCATCATCACGTGTACAGAAACCTTTTGAAAGATCTCAGTGTTCAGGATTGGTCTGATCAGAATGCAAGCAGCATAGCCTCTGAGATATGTGGATTTATCAACGTACATTAG 213 0.3991 MQLNASQIKVLQGQDDVISSMKEAASKELLNVSHHHHVYRNLLKDLSVQDWSDQNASSIASEICGFINVH 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1014 70 Pfam ATP synthase (E/31 kDa) subunit 2 49 IPR002842 GO:0033178|GO:0046961|GO:1902600
Ssu4g1014 70 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 50 - -
Ssu4g1014 70 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 50 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1014 Ssu-Chr4 16243542 16245245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g1014 1 49 Primary Pumps ATPases(2) AT1G64200 63.636 5.01e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1014 K02150 - gmx:100795235 87.0409