Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0999 ATGGAGGTTGGAAAGAAGAAGATGCTCAAGTCTTTGATCAAAAAGGTGATAAAGGGTCTTCCATTCTTAGCACCCAATGGAGCACATACGAGAAGAGTTTGTTATTTGAGTGACATTGATGACGAGAATGAAACGACAACAAAGGTGCCAGAAGATGTTAAAGAAGGACATTTTGCGGTTATAGCAATGCAAGGTGAAGAACCCAAGAGGTTCGTTGTTGAGTTAGATTATTTAACTGATCCTGCTTTCTTGAAGCTGCTAGAGCAAGCAAGGGAAGAGTATGGCTTTGAACAGAAGGGTGCACTTGCAGTCCCCTGCAGCCCCCAAGAACTTCAGAAGATTATAGAGAATCGACGAGTGGACAATTCCACTACCTAA 378 0.4259 MEVGKKKMLKSLIKKVIKGLPFLAPNGAHTRRVCYLSDIDDENETTTKVPEDVKEGHFAVIAMQGEEPKRFVVELDYLTDPAFLKLLEQAREEYGFEQKGALAVPCSPQELQKIIENRRVDNSTT 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0999 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 121 IPR003676 GO:0009733
Ssu4g0999 125 Pfam Auxin responsive protein 37 115 IPR003676 GO:0009733
Ssu4g0999 125 PANTHER F8A24.8 PROTEIN 7 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0999 Ssu-Chr4 15988459 15988836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0999 31 124 Calmodulin-binding Proteins AT3G43120 39.000 3.11e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0999 - K14488 gmx:102661602 198.749