Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0986 atgaaacgaGTGGAGAGGAGATTTGAGATGATGGCTCGCAGTATATCGTACGTAACGGGGTCGCAGCTTCTCTCTTTGAGAAGCAATCCAAGCATCGCCATCGTTGATGTCAGGGACGAGGAGAGGAGTTCTGACGGGCATATCTCGGGGTCTCTTCATTACGCGAGCGACACTTTCTCTGACAACATCTCAAATCTCGTTCAGGCAGTTGAAGGCAAAGACACCCTCGTCTTCCACTGCGCTCTAAGTCAGGTTCGTGGCCCAACTTGTGCTAGGAGGCTTGTCAATTATCTTGAGGAGAGCAAGGAAGATACTGGGATAAAGAACATTATGGTCTTGGAACGTGGCTTCAACGGGTGGGAAGCTTCTGGTAGGCCTGTTTGCCGCTGCACTAATGTTCCTTGCAAAGGAGAGTGA 417 0.494 MKRVERRFEMMARSISYVTGSQLLSLRSNPSIAIVDVRDEERSSDGHISGSLHYASDTFSDNISNLVQAVEGKDTLVFHCALSQVRGPTCARRLVNYLEESKEDTGIKNIMVLERGFNGWEASGRPVCRCTNVPCKGE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0986 138 Coils Coil 136 138 - -
Ssu4g0986 138 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 136 IPR036873 -
Ssu4g0986 138 Gene3D - 10 138 IPR036873 -
Ssu4g0986 138 SMART rhod_4 18 126 IPR001763 -
Ssu4g0986 138 PANTHER M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 7 135 - -
Ssu4g0986 138 Pfam Rhodanese-like domain 22 122 IPR001763 -
Ssu4g0986 138 ProSiteProfiles Rhodanese domain profile. 28 129 IPR001763 -
Ssu4g0986 138 PANTHER ARSENATE REDUCTASE 2.1 7 135 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0986 11 85 Sulfurtransferasese or Rhodanese AT5G03455 73.333 2.05e-35 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0986 K18065 - gmx:100305790 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0986 4 15712590 15714935 Ssu4g0986 4 15712590 15714935 ECH