Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0982 ATGTTCTCACCAGCCATTGGTTCATGCTATTTGCATCTTTACTCATCATGGCCGCTGCAGGGGCAGCCTACATGTTTGGCATTCTACCATGCCTTCTACGGTGATCACAACCCTCAGGCTCTTATCTTGCTCATTGCATGGCTCCCTGCCGCtgtttctttcctcttccttccAACAGTTCGGATATTGAAGACAGTTCACCAACCCAATGAGAACAAAGTTTTCTACAATCTTCTATATATTTCACTTGCCCTTGCCGGGTTTCTCATGGTTTTGATCTTTATACAAAACAAGCTCAGTTTTACAAGGACCGAATACGTAGCCGATGGGGTTgtggtttttttctttctccttctcccGCTTGTTGTGGTATTTAGAGAGGAATTAAACCAGTTGAAAGCCAAAACGCAAGCCTTGACCGATTCGGCACCCAAGTTGAAAGTAGTCGCAGAAATTCCACCTCCAAACGTGGAGCAAGAAGCACCAGCTACCACAAGCTCGCACGAGAAAAGTTCTTGTTTGGGGAACATACTCAAACCCCCGAAGAGAGGAGAAGACTACACTATTTTGCAAGCGCTTTTCAGTATTGACATGCTGATTCTGTTCATTGCAACAACATTTGGTGCTGGCGGAGCATTAACGGCCATAGACAATCTGGGACAGATTGGACTCTCATTGGGATACCCTAGGAAGAGCATTACAACCTGTGTGTCCTTATTGAGCATATGGAACTACTTGGGACGGGTAGTTGCAGGTTATGCCTCTGAAACATTCTTGACCAAATACAAACTCCCTCGTCCCTACATGCTCACTCTAGTTATCCTTCTCTCTTGTGTTGGCCATATTCTGATTGTCCTTGGTGCCCCAAACTCTCTCTACTTCGCTTCCGTGATTATTGGGTTCAGTTTGGGAGCTCAGTGGCCGCTATTGTTTGCGATCATATCAGAAATATTTGGCCTTAAATACTACTCCACGTTTTTCAACTTTGGAGCCGTGGCAAGCCCTGTTGGGTCTTACATTCTGAACGTGAGACTGACGGGTGTTTTGTATGATAAAGAGGCTTTGAAACAGTTGAAGGCCAAAGGACTCACGAGACAAGCGGGGAAGGACCTAACTTGCGTAGGAGTGCAGTGCTACAGAATGGCTTTTATCATAATCACGGCTGCGACGCTGCTTGCCTGCTTTGTTTCGTTTGTTTTGGTGCTGAGGACTAAAACATTTTACAAAGGGGATATCTACAGAAAGTTCAGAGTGGAACATGAAACAGGAGAGAATGAAACGGGGATCACCAAAACTGGTAATAGTgttgagaattttaattaa 1323 0.4316 MFSPAIGSCYLHLYSSWPLQGQPTCLAFYHAFYGDHNPQALILLIAWLPAAVSFLFLPTVRILKTVHQPNENKVFYNLLYISLALAGFLMVLIFIQNKLSFTRTEYVADGVVVFFFLLLPLVVVFREELNQLKAKTQALTDSAPKLKVVAEIPPPNVEQEAPATTSSHEKSSCLGNILKPPKRGEDYTILQALFSIDMLILFIATTFGAGGALTAIDNLGQIGLSLGYPRKSITTCVSLLSIWNYLGRVVAGYASETFLTKYKLPRPYMLTLVILLSCVGHILIVLGAPNSLYFASVIIGFSLGAQWPLLFAIISEIFGLKYYSTFFNFGAVASPVGSYILNVRLTGVLYDKEALKQLKAKGLTRQAGKDLTCVGVQCYRMAFIIITAATLLACFVSFVLVLRTKTFYKGDIYRKFRVEHETGENETGITKTGNSVENFN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0982 440 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 436 - -
Ssu4g0982 440 PANTHER MFS TRANSPORTER 28 436 - -
Ssu4g0982 440 SUPERFAMILY MFS general substrate transporter 25 405 IPR036259 -
Ssu4g0982 440 Pfam Nodulin-like 28 125 IPR010658 -
Ssu4g0982 440 Pfam Major Facilitator Superfamily 202 403 IPR011701 GO:0022857|GO:0055085
Ssu4g0982 440 Gene3D MFS general substrate transporter like domains 185 407 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0982 Ssu-Chr4 15664547 15665869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0982 29 417 Nodulin-like Gene Family AT2G39210 60.705 4.29e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0982 - - gmx:100798313 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0982 4 15664547 15665869 Ssu7g2464 7 48081015 48082154 PCT