Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0981 ATGGTGGTGACAGAGTTCACTAGTGGTGGTTGGAGAGGAATGAAGACCTTCAGCCACCATGTTATCACCGGCCGTTGGTTCATGCTATTTGCATCGTTACTTATCATGGCCGTTGCTGGTGCAACCTATATGTTTGGAATATACTCTAACGAGGTCAAAACCGCGTTGGGATACGACCAGTCCACTCTCAACTTGGTCAGTTTCTTCAAAGACCTTGGGGCCAACGTCGGAGTCATATCTGGGTTGGTCAACGAGGTAACCCCACCCTGGGTGGTACTCTCAATAGGGGTCATTATGAACTTCTCTGGCTACTTCATGATATGGCTCGCTGTCTCGGGCCGCATTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCGTTGGTGCAAATTCTCAAACCTTTGCCAACACCGGTGCTTTAGTCACGTGTGTCAAGAACTTCCCTGGAAGCCGTGGCAGTATTTTGGGCCTGCTCAAAGGCTACGTTGGCCTAAGTGGTGCCATCATCACGCAACTCTACCATGCCTTCTATGGTGATCGCAACCCTCAGGCTCTTATCTTGCTCATTGCTTGGCTCCCTGCTGCTGTTTCCTTCCTTTTCCTTCCAACAATTCGGATAATGAACACGGTGCACCAACCCAAAGACAACAAAGTTTTCTACCACCTTCTATATATTTCACTTGGCCTTGCTGGGTTTCTCATGGTTTTGATCGCTATACAGAACAAGCTTAGTTTTACAAAGACCGAGTACATAGTCGATGGCCTTGTGgttttctcctttcttcttctcccaCTTGCTGTGGTATTTAGAGAGGAGATAAACCAATTGAAAGCCAAAACGCAAGGTTTGACCGATTCTGAACCCCCGTTGAAAGTAGTCACAGAAGTTCCACATCCAAACGGGGCATTACCGGAGCAGGAAGAACCAGCTACCACAAGCTCGCACGAGAAAAGTTCTTGTTTGGGGAACATACTCAACCCCCCTAAAAGGGGAGAAGACTACACCATTTTGCAAGCCTTGTTCAGTATTGACATGCTGATTCTGTTCATTGCAACAACATTTGGTGCTGGTGGAACACTAACGGCCATCGACAACCTGGGACAGATTGGACACTCGTTGGGATACCCGAGTAAGAGCACTACAACTTTTGTGTCCCTAGTAAGCATATGGAACTACTTGGGACGGGTAGCTTCAGGTTATGCCTCTGAAATATTTTTGACCAAATACAAAGTCCCTCGTCCCTACATGCTCACTATCGTTTTGCTTCTCTCGTGTGTTGGCCATATTCTGATAGCCCTTGGTGTCCCAAACACTCTCTACTTCGCTTCTGTGATTATTGGGTTTTGTTTTGGAGCTCAGTGGCCGCTAATGTTTGCAATCATATCAGAAATATTTGGCCTTAAATACTACTCCACGTTGTACAACTTTGGAGCTGTGGCAAGCCCTGTTGGGTCTTACATTCTAAACGTGAGAGTGGCTGGTGCTTTGTATGATAAAGAGGCTTTGAAACAGTTGAAGGCCAAAGGACTCAGGAGACAAGCAGGGAAGGACCTAACTTGCATAGGAGTGGAATGCTACAAAATGTCTTTTATCATAATCACGGCTTCAACGTTGATTGGTTGTTTTGTTTCGTTCATTTTGGCGCTGAGGActagaaaattttacaaagggGATATCTATAGAAAGTTCAGAACGGAACATGAAACAACAGAGAATGAGATGGGGATTACTAAGACTGGTAATTAA 1752 0.4475 MVVTEFTSGGWRGMKTFSHHVITGRWFMLFASLLIMAVAGATYMFGIYSNEVKTALGYDQSTLNLVSFFKDLGANVGVISGLVNEVTPPWVVLSIGVIMNFSGYFMIWLAVSGRIAKPQVWQMCLYICVGANSQTFANTGALVTCVKNFPGSRGSILGLLKGYVGLSGAIITQLYHAFYGDRNPQALILLIAWLPAAVSFLFLPTIRIMNTVHQPKDNKVFYHLLYISLGLAGFLMVLIAIQNKLSFTKTEYIVDGLVVFSFLLLPLAVVFREEINQLKAKTQGLTDSEPPLKVVTEVPHPNGALPEQEEPATTSSHEKSSCLGNILNPPKRGEDYTILQALFSIDMLILFIATTFGAGGTLTAIDNLGQIGHSLGYPSKSTTTFVSLVSIWNYLGRVASGYASEIFLTKYKVPRPYMLTIVLLLSCVGHILIALGVPNTLYFASVIIGFCFGAQWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVRVAGALYDKEALKQLKAKGLRRQAGKDLTCIGVECYKMSFIIITASTLIGCFVSFILALRTRKFYKGDIYRKFRTEHETTENEMGITKTGN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0981 583 SUPERFAMILY MFS general substrate transporter 24 556 IPR036259 -
Ssu4g0981 583 MobiDBLite consensus disorder prediction 298 321 - -
Ssu4g0981 583 CDD MFS_Mch1p_like 24 543 - -
Ssu4g0981 583 Pfam Nodulin-like 25 271 IPR010658 -
Ssu4g0981 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 581 - -
Ssu4g0981 583 PANTHER MFS TRANSPORTER 8 581 - -
Ssu4g0981 583 Gene3D MFS general substrate transporter like domains 337 557 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0981 Ssu-Chr4 15626004 15627755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0981 14 568 Nodulin-like Gene Family AT2G39210 67.679 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0981 - - gmx:100797779 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0981 4 15626004 15627755 Ssu4g0981 4 15626004 15627755 ECH