Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu4g0933 | ATGATTGCTGAATCAAACATGAGACCCAGCTTCCATTTTTGCTAtgcctttcttcttttccttgtCCTTGGCCATCACACTTCTTCACAGAAGACTTGTCCAAACTGTGGATCTATGCAAGTTCCATATCCTTTGAGCACAGATCCAAGTTGCGGTGATCCACACTATAAACTTGGTTGTGATCCCCACTCTGAAAGGCTTTACTTTGACGCACTCAATGGAAGTTCCTATCTCGTTCTCAGAATCATGTCTTCAATCCAGCGCATGGTGGTACAGCCATCACCTTGGTTACCAGGTTCATGTGTCACACAAGACATGCCAAGAAGCAATGGTATATGGTTAAACCAGTCACTCCCTTTCAACATCACTTCATCTAACACATTGTTCCTCTTTAATTGTTCCCCTCGCCTCTTGGTTTCTCCGCTTAACTGCACTTCTTCTAGCATTTGCCATCGTTACTTGGAGAGTTCAGGTCATGTTGACACAAAACGAGCACAAGAGTGTGCAAGTGGTCTTCACCCTTGTTGCACTTTTGTAGCTGGTGGAATACCTTCGGCTTACAGGATCAGGCTTCATGAGTCTGGTTGCAAAGCATTCAGAAGCATTCTTCATTTGGACCAAGACAAGCCTCCAAATCAGTGGGAGGAAGGCCTTGAAATTCAATGGGCACCTCCACCTGAACCAGTGTGCAAGACACAAAGGGATTGCTCTCGAGACTCTACGTGTTCCCCTTCTGGTAGAAATGGCCTATTTCGCTGTCTTTGTAATGGGGGACACAGTTGGAACCCTTTTGTAGCAACCTGTGTGAGGTATGAGAGAAAATCCAAATGGAAAACCGGCTTGTTGGCCTCAATAGGGGTTGTTgttacttttttctctcttgctgTGGTTCTGGCCATAATCACAAAGTCCTGTAGACTCTCTACCTTTAGAGAGAAACAGGCCAAGGAAAGAGAAGATGGGCTGAAATCAAGAGCTGGGGAGAAGCCTTGTAGGATGTTTCCACTGAAAGAGGTGAAGAAAGCAACAGATGGTTTTTCCCAAGCGAGGATCTTAGGGAGTGGTGGCTTTGGCGAAGTTTTCAAAGGTGAGTTACAAGATGGAACATTAGTGGCTGTGAAGAAGGCTAGAGTGGGAAACCTGAAAAGCACCCAACAAGTGCTTAATGAGGTTGCAATACTTTCTCAAGTGAATCACAAGAACCTAGTCAGGCTCTTGGGGTGCTGTGTGGAATCTGAGCTGCCTCTGATGATCTATGAGTATATCTCAAATGGGACCCTCTATGACCATCTTCATGGTAGGTATTGTTCCAACTTTCTAGACTGGAAAACAAGGCTGAAAGTTGCTTTTCAAACTGCAGAAGCATTGGCTTACTTGCATTCTGCTGCACACACTCCCATCTACCATAGAGATGTTAAGTCAACAAACATACTATTGGATGATGAATTCAATGCCAAGGTCTCAGATTTTGGACTTTCCAGATTGGCTAACCCGGGACTTAGTCATGTCTCAACATGTGCTCAGGGAACGTTGGGGTACTTGGATCCTGAATACTACCGCAACTACCAGTTAACAGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGCTAGAGATTTTGACTTCCCAGAAAGCGATAGACTTCAACCGTGATCAAGATGGTGTCAATCTAGCAATTCATGTGAATCAACATGCCAGCAATGGTACAATCATGGAAGTGGTGGATCAAAGGCTTCTTTCCGTGGAGCCCTTGGGGGATAAAATGTTCACAAGCATAAAACTCTTCTTGGAGCTTGCACTTGAATGTCTAAGGGAGAAGAAAGGTGAAAGGCCTAATATGAGGGATATTGTTCAACGCCTACTATGCATAGTTAGGATTGTAGAACAAGAGTGA | 1896 | 0.4341 | MIAESNMRPSFHFCYAFLLFLVLGHHTSSQKTCPNCGSMQVPYPLSTDPSCGDPHYKLGCDPHSERLYFDALNGSSYLVLRIMSSIQRMVVQPSPWLPGSCVTQDMPRSNGIWLNQSLPFNITSSNTLFLFNCSPRLLVSPLNCTSSSICHRYLESSGHVDTKRAQECASGLHPCCTFVAGGIPSAYRIRLHESGCKAFRSILHLDQDKPPNQWEEGLEIQWAPPPEPVCKTQRDCSRDSTCSPSGRNGLFRCLCNGGHSWNPFVATCVRYERKSKWKTGLLASIGVVVTFFSLAVVLAIITKSCRLSTFREKQAKEREDGLKSRAGEKPCRMFPLKEVKKATDGFSQARILGSGGFGEVFKGELQDGTLVAVKKARVGNLKSTQQVLNEVAILSQVNHKNLVRLLGCCVESELPLMIYEYISNGTLYDHLHGRYCSNFLDWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVSDFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLEILTSQKAIDFNRDQDGVNLAIHVNQHASNGTIMEVVDQRLLSVEPLGDKMFTSIKLFLELALECLREKKGERPNMRDIVQRLLCIVRIVEQE | 631 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu4g0933 | 631 | Gene3D | Phosphorylase Kinase; domain 1 | 316 | 421 | - | - | |
Ssu4g0933 | 631 | Gene3D | Transferase(Phosphotransferase) domain 1 | 422 | 630 | - | - | |
Ssu4g0933 | 631 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN | 23 | 631 | - | - | |
Ssu4g0933 | 631 | SUPERFAMILY | Protein kinase-like (PK-like) | 327 | 621 | IPR011009 | - | |
Ssu4g0933 | 631 | CDD | STKc_IRAK | 352 | 621 | - | - | |
Ssu4g0933 | 631 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 23 | 631 | IPR045274 | GO:0007166 | |
Ssu4g0933 | 631 | ProSitePatterns | Protein kinases ATP-binding region signature. | 352 | 375 | IPR017441 | GO:0005524 | |
Ssu4g0933 | 631 | ProSiteProfiles | Protein kinase domain profile. | 346 | 622 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g0933 | 631 | Pfam | Protein tyrosine and serine/threonine kinase | 349 | 621 | IPR001245 | GO:0004672|GO:0006468 | |
Ssu4g0933 | 631 | SMART | serkin_6 | 346 | 622 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu4g0933 | 631 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 467 | 479 | IPR008271 | GO:0004672|GO:0006468 | |
Ssu4g0933 | 631 | Pfam | Wall-associated receptor kinase galacturonan-binding | 33 | 91 | IPR025287 | GO:0030247 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu4g0933 | Ssu-Chr4 | 14871050 | 14872945 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu4g0933 | 33 | 631 | Receptor kinase-like Gene Family | AT5G02070 | 47.200 | 0.0 | 527 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Ssu4g0933 | PK_Tyr_Ser-Thr | 5.8e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu4g0933 | - | - | gmx:100804678 | 1199.5 |