Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0906 ATGCAAGAGATGGTTGAGTTGCAGCAGCAGCAGAGAACAATCCTTCAACATGCGAGACAAGTGAATCAAAGGCTCCAATCTGCAGAGCTGGTACAGAAACAAATGGTTTCTTTCTTGGCAAGGTTACTTGAAAACCCAGTGTTTTTAACCCGCCTTCAGCATgagaaggaagaaagagataaaaggtctCCTGAAGTAAGAAGGAAGTTTGTCAAGCAGCACCAAGGCCAAGCAGGAATATCAGATTTTTTGAAGGAGGGCCAGATTGTAGGATACCAACCTGATTGGAGAAATGTAACCATCTCTTCTGAAGCACTAGAAATGTATCCAGTTTCACTTGAAGAGTGTCCAAATTACCTTTCACAGGCTTTGGCAAAAGAATTGAGTGAAGGTGCAGAGAATCTGATATCAGATGAATTGGCCACAGTGCATGAGGTGATGCCAACCGCTGACACCATTGCAGAAAAGTCATCAAACTTTGTACTTGAAGATACCCTTTTTAAAGGGAAAAATGTCATGAGCTCAAATCAGGAAGTTCTTGCAGAGGACTTTGTTCCTTTCCCTGTGGAGTTGACCAAGGAGGTAGGATTTCCTGAGTTTTCACTTCTTGGAAATGAAAGCATCATCAAGCAAGAAGATAAATGGAACACCAGCTTTAATGTTAGTGGCGCTCCTTCAAGCTCTGGGAATGAGCCGTGGGGAAATCCTATCAATTATGAAGTGCCAGAATTTGGAGTCACAAGTGTTATGTCAGACATGTGGGATAGTGGCTTACTGTAA 780 0.4128 MQEMVELQQQQRTILQHARQVNQRLQSAELVQKQMVSFLARLLENPVFLTRLQHEKEERDKRSPEVRRKFVKQHQGQAGISDFLKEGQIVGYQPDWRNVTISSEALEMYPVSLEECPNYLSQALAKELSEGAENLISDELATVHEVMPTADTIAEKSSNFVLEDTLFKGKNVMSSNQEVLAEDFVPFPVELTKEVGFPEFSLLGNESIIKQEDKWNTSFNVSGAPSSSGNEPWGNPINYEVPEFGVTSVMSDMWDSGLL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0906 259 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 1 256 - -
Ssu4g0906 259 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 256 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0906 Ssu-Chr4 14374568 14375347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0906 1 248 HSF AT5G03720 31.373 3.39e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0906 K09419 - gmx:100788429 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0906 4 14374568 14375347 Ssu4g0906 4 14374568 14375347 ECH