Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu4g0884 | ATGGACGAaaCTGAACTTTGTGGATGGGGAGTGGAGGCCGCCGAAACAATCGATAAAGGTGGATTTATAATTGAGTATATTGGAGAAGTCATTGACGATGCTTTATGTGAAGAAAGGCTTTGGGACATGAAATACAGGGGCGTACAGAATTTTTACATGTGTGAGATTCGGAAAGATTTCACAATAGATGCAACTTTCAAAGGAAATACTTCACGCTTTTTGAACCATAGCTGTGATCCCAACTGTGTTTTGGAAAAGTGGCAAGTTGATGGTGAAACACGTGTGGGTGTATTTGCTGCTCGTTCAATAGAAGCTGGAGAGCCGTTAACATATGATTACAGATTTGTGCAATTTGGTCCAGAGGTGAAATGCCACTGTGGTGCAGGAAATTGTCAAGGCTTTCTAGGGACGAAAAAGAAAATTGGCAAGCTAGACCTCTGTTGGGGTTCAAAACGTAAGCGAACATCAAATGCTTGCATTACGTTGGTAACAACTGTATGA | 501 | 0.4152 | MDETELCGWGVEAAETIDKGGFIIEYIGEVIDDALCEERLWDMKYRGVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIEAGEPLTYDYRFVQFGPEVKCHCGAGNCQGFLGTKKKIGKLDLCWGSKRKRTSNACITLVTTV | 166 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu4g0884 | 166 | Gene3D | SET domain | 1 | 154 | IPR046341 | - | |
Ssu4g0884 | 166 | PANTHER | SET DOMAIN PROTEINS | 3 | 164 | - | - | |
Ssu4g0884 | 166 | Pfam | SET domain | 8 | 113 | IPR001214 | GO:0005515 | |
Ssu4g0884 | 166 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 | 3 | 164 | - | - | |
Ssu4g0884 | 166 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 3 | 165 | IPR025787 | - | |
Ssu4g0884 | 166 | ProSiteProfiles | SET domain profile. | 1 | 114 | IPR001214 | GO:0005515 | |
Ssu4g0884 | 166 | SMART | set_7 | 1 | 120 | IPR001214 | GO:0005515 | |
Ssu4g0884 | 166 | ProSiteProfiles | Post-SET domain profile. | 120 | 136 | IPR003616 | - | |
Ssu4g0884 | 166 | SUPERFAMILY | SET domain | 4 | 133 | IPR046341 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu4g0884 | 4 | 136 | C2H2 Transcription Factor Family | AT2G23740 | 38.158 | 1.38e-21 | 89.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Ssu4g0884 | SET | 1.3e-18 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu4g0884 | - | - | aprc:113859744 | 337.035 |