Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0878 ATGGGAGAACTACCAGTGGCTAGAACCTTTGCCGTGGAAAATCACCACCACAATTTGCTAGAGGCTGCGATTGGAGACAAGCAGTTAGCCGGAGAGTCCAAAATACATAGTTATGGAAAGAGTTTCAACGGGTTCGTTGCACGACTTTTGCCACATGAGGCAGAGAGATTGCGAGAGGAGGACAGTGTTGTATCTGTGTTTCCAAATACACACCGCAAATTACACACAACAAGGTCATGGGATTTTCTAGGAATGCCCCTAAACGTGAAGAGAAACTCCAACGTAGAAAGTCATATCATTGTGGGCGTGTTAGATACAGGTATTTGGGTTGATTGCCCCAGTTTCAACGATAAGGGGTATGGACCTCCCCCACGTAGATGGAAGGGCAAATGTGTAACGGGAGCAAACTTTACTGGCTGCAACAACAAGGTGATTGGAGCAAAACACTTCAATCTGGCCGAGAGCAACCCAACCTCGGACAACCTCAGTCCGGCCGACGACATGGGGCACGGCACTCACACGGCGTCCACGGCGGCGGGCGCGGCGGTGAAGGGTGCGAGTCTTTACGGCATTGGCAAAGGCACGGCGAGGGGTGGGGTCCCGTCTGCCCGCGTGGCCATGTACAAGGTTTGCTGGTCCACTGGCTGCAGCGACATGGACATGCTCGCCGCCTTCGACGAGGCCATCGCCGACGGCGTCAACTTCATATCCGTGTCCATAGGAGGCCCCTCCCGTGACTTCTTCACTGACCCAATTGCCATTGGAGCATTCCACGCTATGGGCAGAGGAATTCTCACTTCTTGCTCCGCTGGCAACGCTGGCCCTCGCCCCATGTCGGTGGAGAACGTCGCTCCCTGGATTTTGACGGTGGCTGCGTCCGCCGTTGATCGACAGTTCACCACACTTGTTGCTTTCGGTGACGGAAAGAACATAACAggactgtCTATTAATACCTTTTCTCCCAAGAAAAAGATGTATCCATTGACTAGTGGACTCCTTGCGGCTAACCTTACTGGAGAAGGCTATGGCAATCCTGGTGGTTGTGATTATGGTACTCTAAGGAAGGACAAAGTGAAGGGCAGGATAGTGTACTGCGTTGGGGGAACGGGCACTCAGGACTTGACCATCAAAGAATTAGGGGGAGCAGGGACCATCATAGGActtgaagagaaaatagatgCCTCCTACACCACGGTTATTCCAGGGACCTTTGTTGAAGCCAGTACCGTGGGCAAAACCGTCGATCTCTACATCAATTCcacaaaGAATGCTAAAGCGGTTATTTACAAGACAACAACTACAGAAATCCCTGCTCCATATCTTGCTTCTTTTTCATCCAGAGGTCCTCAAACGGTCACCCCAAATATCCTCAAGCCTGACTTGGTTGCCCCGGGAGTGGATATACTTGCTGCTTATTCCAAACTGGCAACACTAACAGGGTACCATGAAGACAACCGTTACGACgtatttaacataatatcaggAACATCTATGTCATGCCCACATGCCACTGCAGCCGCTGCCTATGTCAAATCCTTCCACCCTGACTGGAGTCCTGCTGCAATTAAATCTGCTCTCATGACCACTGCCACTCCCATCAAAATCAGTGACAATTTCACGGAACTGGGATCTGGGTCGGGACAGATTGACCCTGTAAAAGCATTGCATCCTGGCCTGCTTTACGACATTAGAAAGAACTCCTATATTGCCTTCCTTTGCAAGCAAGGCTTCAACAACACCAACATTGGCATACTAATAGGCAGCAAAAATTTCAATTGCTCAAGCATTAAGCCTGCGCCAGGCACTGATGGAATCAACTACCCCAGCATGCATGTCCAGCTCTTGAGTGCCGATTCTAGAATTTCTGCGGTTTTTCATCGGACTGTGACTAATGTAGGATCTGGAAATTCAACTTACAAGGCTAAAGTCACAGCACCCAAGGGTCTTTCCGTGAAGGTCATCCCAGACACGTTGAACTTTAGTCAGTTGCACCAAAAACTGTCGTTTAAGGTTGTGCTGAAGGGGTCTCCAATGCCGAAAGAGACATTTGTAGAATCTGCATCACTTGAATGGAATGACTCTAAACACACTGTCAGAAGTCCAATACTTGTCTTTAAGCCAACGTATTGA 2130 0.4859 MGELPVARTFAVENHHHNLLEAAIGDKQLAGESKIHSYGKSFNGFVARLLPHEAERLREEDSVVSVFPNTHRKLHTTRSWDFLGMPLNVKRNSNVESHIIVGVLDTGIWVDCPSFNDKGYGPPPRRWKGKCVTGANFTGCNNKVIGAKHFNLAESNPTSDNLSPADDMGHGTHTASTAAGAAVKGASLYGIGKGTARGGVPSARVAMYKVCWSTGCSDMDMLAAFDEAIADGVNFISVSIGGPSRDFFTDPIAIGAFHAMGRGILTSCSAGNAGPRPMSVENVAPWILTVAASAVDRQFTTLVAFGDGKNITGLSINTFSPKKKMYPLTSGLLAANLTGEGYGNPGGCDYGTLRKDKVKGRIVYCVGGTGTQDLTIKELGGAGTIIGLEEKIDASYTTVIPGTFVEASTVGKTVDLYINSTKNAKAVIYKTTTTEIPAPYLASFSSRGPQTVTPNILKPDLVAPGVDILAAYSKLATLTGYHEDNRYDVFNIISGTSMSCPHATAAAAYVKSFHPDWSPAAIKSALMTTATPIKISDNFTELGSGSGQIDPVKALHPGLLYDIRKNSYIAFLCKQGFNNTNIGILIGSKNFNCSSIKPAPGTDGINYPSMHVQLLSADSRISAVFHRTVTNVGSGNSTYKAKVTAPKGLSVKVIPDTLNFSQLHQKLSFKVVLKGSPMPKETFVESASLEWNDSKHTVRSPILVFKPTY 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0878 709 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Ssu4g0878 709 SUPERFAMILY Subtilisin-like 88 555 IPR036852 GO:0004252|GO:0006508
Ssu4g0878 709 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 101 111 IPR023827 -
Ssu4g0878 709 PANTHER CUCUMISIN PROTEIN 1 706 - -
Ssu4g0878 709 CDD PA_subtilisin_like 306 428 - -
Ssu4g0878 709 Pfam Fibronectin type-III domain 605 704 IPR041469 -
Ssu4g0878 709 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 706 IPR045051 -
Ssu4g0878 709 PRINTS Subtilisin serine protease family (S8) signature 166 179 IPR015500 -
Ssu4g0878 709 PRINTS Subtilisin serine protease family (S8) signature 96 115 IPR015500 -
Ssu4g0878 709 PRINTS Subtilisin serine protease family (S8) signature 494 510 IPR015500 -
Ssu4g0878 709 ProSiteProfiles Serine proteases, subtilase domain profile. 79 555 - -
Ssu4g0878 709 CDD Peptidases_S8_3 73 531 IPR034197 -
Ssu4g0878 709 Gene3D - 572 706 - -
Ssu4g0878 709 Gene3D - 296 434 - -
Ssu4g0878 709 Pfam Subtilase family 97 532 IPR000209 GO:0006508|GO:0008236
Ssu4g0878 709 ProSitePatterns Serine proteases, subtilase family, serine active site. 495 505 IPR023828 -
Ssu4g0878 709 Gene3D Peptidase S8/S53 domain 99 568 IPR036852 GO:0004252|GO:0006508
Ssu4g0878 709 Pfam Peptidase inhibitor I9 11 75 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0878 Ssu-Chr4 13783953 13788263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0878 1 529 Subtilisin-like Serine Gene Family AT5G03620 62.082 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0878 - - gmx:100793716 1275