Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0877 ATGGAGCTTGAACCTTTTGCTCTGTGCTCGCTGATGCAGCTCTTCACTAACGTCTCCTTTGGCACACTGTGTCTTTCACTGGCCATTCTCACCCTCGTGATTCTCGCTACTTTTTCATCTCTCTGCCCTCGCTGGCCCAGGACGAGCACGTTCTTCTGTAGCTGCGAGACTTGCCAGGCCTATCTCACTTCAAGCTGGTCCGAGAACTTCGACAACCTCTGCGACTGGTACTCTCATCTCCTCCGAAACTCGCCGACCAAAACCATCCACATCCACGTGCTGGGCAACACCATCACCGCCAACCCGGACAACGTGGAGTACATGCTGAAGACGAGGTTCGAGAATTTCCCAAAGGGGAAAACGTTTTCCGCGATCCTCGGCGATTTTCTCGGGCGAGGTATTTTCAACGTGGACGGGGAACCGTGGAGCTTCCAGAAGAAGATGGCGAGCTTGGAACTCGGCAAGAACTCGATACGATCCTTCGCGTTCGAGGTTGTCAAATTCGAAATCCAACACCGACTCGtccctcttcttcttttgtcgAAACAAAACGACGGCGTTTTGGATTTGCAGGATGTTTTCAAGAGATTCTCGTTCGACAGCATTTGTAGATTCTCCTTCGGGTTGGACCCTATGTGTCTTGAGCTCTCTCTGCCTATCTCGGATTTCGCTCTTTCCTTTGACTTGGCATCGAAACTGTCCGCGGAGAGAGCCATGTCGGTGTCCCCTCTAGTTTGGAAGATCAAAAGGTTGCTCAACGTAGGCACCGAGAGGAGGCTACGAGAAGCGGTTAAAATGATTAACATCTTAGCCAAAGAGGTTATAAGGCAAAGAAGGAAAATGGGGTTCTCTTCTCACAAGGACTTGCTGTCACGGTTCATGAGTAGTGTCAACGATGAGACATACTTAAAGGACATTATCATAAGTTTCTTACTAGCTGGTCGTGACACCGTGGCTTCGGCTCTAACGAGCTTCTTCTGGCTATTGGCAAAACACCCAGAAGTGGAATCAGCGATTCTTCTAGAAGCAGAGCGAGTAATTGGTTCAGACAATAAGAAGGAGATCACAAGCTATGAAGAGCTTCAACAGCTGCACTATTTACAAGCGGCGGCGTTTGAGAGCATGAGGCTCTACCCTCCAATTCAATTCGATTCAAAGTTTTGTTTGGAGGATGACGTGTTGCCTGATGGGACGTTTGTGAAGAGAGGGACTAGGGTTACTTACCATCCATACGCGATGGGTCGTTTGGAGGAGATATGGGGTTCGGATTGGTTTGAGTTTAGGCCCGAAAGGTGGTTGAAGGATGGGGTGTTTCGCCCTCACAATCCCTTTAAGTACCCCGTTTTTCAAGCGGGGATGAGGGTGTGTTTGGGCAAAGAAATGGCTCTGATGGAGCTCAAAAGCGTGGCGCTTTCGTTGCTTCGACGGTTCCACATCGAATTACTCGCACCCCATCATCGCACCCCACGTTTCTCTCCTGGCCTCACTGCCACTTTTAGTTGCGGCCTTCCCGTAAAGGTACGTGAACAAGGAACCCAACCACACCCTCATCATTCATAG 1560 0.4929 MELEPFALCSLMQLFTNVSFGTLCLSLAILTLVILATFSSLCPRWPRTSTFFCSCETCQAYLTSSWSENFDNLCDWYSHLLRNSPTKTIHIHVLGNTITANPDNVEYMLKTRFENFPKGKTFSAILGDFLGRGIFNVDGEPWSFQKKMASLELGKNSIRSFAFEVVKFEIQHRLVPLLLLSKQNDGVLDLQDVFKRFSFDSICRFSFGLDPMCLELSLPISDFALSFDLASKLSAERAMSVSPLVWKIKRLLNVGTERRLREAVKMINILAKEVIRQRRKMGFSSHKDLLSRFMSSVNDETYLKDIIISFLLAGRDTVASALTSFFWLLAKHPEVESAILLEAERVIGSDNKKEITSYEELQQLHYLQAAAFESMRLYPPIQFDSKFCLEDDVLPDGTFVKRGTRVTYHPYAMGRLEEIWGSDWFEFRPERWLKDGVFRPHNPFKYPVFQAGMRVCLGKEMALMELKSVALSLLRRFHIELLAPHHRTPRFSPGLTATFSCGLPVKVREQGTQPHPHHS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0877 519 SUPERFAMILY Cytochrome P450 71 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 47 504 - -
Ssu4g0877 519 PANTHER CYTOCHROME P450 47 504 - -
Ssu4g0877 519 Gene3D Cytochrome P450 61 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 Pfam Cytochrome P450 97 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu4g0877 519 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0877 Ssu-Chr4 13773043 13774602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0877 52 510 Cytochrome P450 AT2G27690 59.914 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0877 K20624 - gmx:102662117 895.96