Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0876 ATGATGGACTCCCACAAGCAACTCTTTCccctcctctctcttttcttaatTCTCTATCTCTCAgGACAAACGGTGCTGCAAGCAGAGGCTCGCCATCATCGTCCAACAAGATTGTTTGTTTTCGGGGACTCATATGCCGACACAGGCAACATTCGAAAAGGTGTAGCAAATTCATGGAAAGACCCTTATGGCATCACCTTTCCTGGCAAGCCCGCCGGTCGATTCTCCGACGGTAGAGTCCTCACCGATTACATTGCTAAGTATTTGAAAGTGAAATCGCCAATCCCCTACAGATTGAGGAAAATGATGCCGCATCATCTGAAATATGGGATGAACTTTGCGTTTGGGGGTACTGGTGTCTTTAACACGTTGGTTTCACTCCCAAACATGACAACCCAGATCAATTTCTTGCAGCAGCTCATCAAAGACAAAGTATATAATGCCTTAGACCTCAGCAAATCAGTGGCCCTCGTCTCTGTCGCTGGAAATGACTACAGTCATTACTTGCAAACAAATGGCTCTGTTGAgGGTTTTCCATCTTTCGTTGCCTCAGTGGTTAATCAGACAGCGACCAATCTGATTCGCATCAAAGGGTTGGGAGTGGAGAAAATTGTGGTGGGTGCTCTCCAACCCCTTGGATGCCTACCCCAGGTCACAGTTTCAACCACATTCCAAAGTTGCAACGCCACCTCAAACGCCCTCGTACTTCTCCACAACACCCTCTTGAACCAAGCAGTGACGGGACTGAACCAAGAAACCAAGGACCGTTCCGCCTTCCTGATCCTCAACCTCTACGACAGCTTCTTGTCGGTGCTGAACCACCCTTCCACCCACAACATTCGGAACAAGCTGAAGCCGTGCTGCGTTGGGGTGAGCAGCGAGTACTCGTGTGGGAGTGtggacaacaacaacaacgtgAAGAAATATCGCGTCTGTGATGACCCTAAATCCGCTTTCTTCTGGGATCTCGTGCACCCCACGCAGGCTGGATGGCACGCCGTGTATAACAAGTTGCGAACCATGAATGCTCTTCAGCAGATTCATTACTAG 1050 0.4714 MMDSHKQLFPLLSLFLILYLSGQTVLQAEARHHRPTRLFVFGDSYADTGNIRKGVANSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLKVKSPIPYRLRKMMPHHLKYGMNFAFGGTGVFNTLVSLPNMTTQINFLQQLIKDKVYNALDLSKSVALVSVAGNDYSHYLQTNGSVEGFPSFVASVVNQTATNLIRIKGLGVEKIVVGALQPLGCLPQVTVSTTFQSCNATSNALVLLHNTLLNQAVTGLNQETKDRSAFLILNLYDSFLSVLNHPSTHNIRNKLKPCCVGVSSEYSCGSVDNNNNVKKYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALQQIHY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0876 349 PANTHER OSJNBB0059K02.9 PROTEIN 1 349 - -
Ssu4g0876 349 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 349 - -
Ssu4g0876 349 SUPERFAMILY SGNH hydrolase 34 338 - -
Ssu4g0876 349 Pfam GDSL-like Lipase/Acylhydrolase 38 337 IPR001087 GO:0016788
Ssu4g0876 349 Gene3D SGNH hydrolase 25 348 IPR036514 -
Ssu4g0876 349 CDD SGNH_plant_lipase_like 36 338 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0876 Ssu-Chr4 13735228 13739611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0876 11 334 Pollen Coat Proteome AT1G75930 27.066 2.55e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0876 - - gmx:100818373 578.941