Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0855 ATGCAAAACAGTGAGGAACAAGAGTACAGAGTCCGGAAATTAGAGATCTCAGACAAGGGCAAAGGTTTCGTCGAGTTACTGCAACAACTCAGCGTTTGCGATTCGGTCTCTGACAAGGAATTCGAGGATCGATTTCGAGAGCTGAGTGCTCTCGGAGATGACCACGTTATCGGCGTGATTGAGGACGAGGCTTCCGGAAAGATCATTGCCACGGGGAGCGTGTTCattgagaagaaatttttgaggAATTGTGGCAAAGTAGGGCACATTGAGGATGTTGTTGTGGATTCCAGTACGCGTGGGAAGCATTTGGGAAAGAGAATCATCAACTTCCTCACAGAGCATGCTCGTTCAATGGGATGCTACAAGGTGATTCTTGATTGCAGCGTCGAGAACAAGGCTTTCTACGAGAAATGTGGCTTCCAGGACAAATCTGTTCAGATGGCTATGTATTTTGTTTGA 462 0.4524 MQNSEEQEYRVRKLEISDKGKGFVELLQQLSVCDSVSDKEFEDRFRELSALGDDHVIGVIEDEASGKIIATGSVFIEKKFLRNCGKVGHIEDVVVDSSTRGKHLGKRIINFLTEHARSMGCYKVILDCSVENKAFYEKCGFQDKSVQMAMYFV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0855 153 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 153 IPR000182 GO:0016407
Ssu4g0855 153 Pfam Acetyltransferase (GNAT) family 39 141 IPR000182 GO:0016407
Ssu4g0855 153 CDD NAT_SF 59 127 - -
Ssu4g0855 153 Gene3D - 6 153 - -
Ssu4g0855 153 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 4 151 - -
Ssu4g0855 153 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 151 IPR016181 -
Ssu4g0855 153 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 4 151 IPR039143 GO:0004343|GO:0006048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu4g0855 Acetyltransf_1 1.4e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0855 K00621 - gmx:100499668 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0855 4 13441855 13442316 Ssu4g0855 4 13441855 13442316 ECH