Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0841 ATGGTATCGTTCAAGAAACTGGCAAAAAAGGTGAGGGCTGTAGGTGGACTTAACTCTGACCCTGACCCTGCTCATCATGAGTGTTTGCTCAAGGGATATGAAGAAGAATTTGCCACTAAGATACCCCCAGTTGGGTTTTTTGCACTTTACGTTGGGGAAGAGCGCCAAAGATATGTGGTTCCAACCCGCTACCTTTCTCACCCCTTATTCAAGATGCTGTTGGAGAAGGCTTACAATGAGTTTGGGTTTTCCCAGAGGAATGGCCTAGTGGTTCCATGCAGTGTTTCCACATTTCAGGAGGTTGTGAATGCTATAGAATGCAACAATGGCAAGTTTAACTTGGGAAATTTTTTTGCAGAATTTGTTTGA 369 0.439 MVSFKKLAKKVRAVGGLNSDPDPAHHECLLKGYEEEFATKIPPVGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSTFQEVVNAIECNNGKFNLGNFFAEFV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0841 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 122 IPR003676 GO:0009733
Ssu4g0841 122 Pfam Auxin responsive protein 35 104 IPR003676 GO:0009733
Ssu4g0841 122 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0841 Ssu-Chr4 13278911 13279279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0841 43 108 Calmodulin-binding Proteins AT5G20810 53.030 1.00e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0841 K14488 - gmx:100776885 214.157