Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0811 ATGGGCAAGAAAATGAAGCTCCCCTCCCTCCTCAAGCACCCACACCCCAACAACAAGAAgttctcctcctcctcttgGCCCTGGCCATCGTGTCACCAACCGCGAACGCTCTCCTTCAGGGCCCAAAACGACGCCGCGTTCAAGACCATCAACGCCGCCTACCTGGACGCCACGGTGGACACGTTGGGGAGCTCCGAGTCCTTCTTCACGGTCTCCCCCGACTCCGGAAGCTTCTCGACCGCCTCGGAAGAAGATTCTAGAAGAGGGGATTCGCTTGAGACGGTGATTCGCGGGTTGCGTTCCGACCGTTTGTTCTTCGAGCAGGACGAGACAAGTTCCATACTAGAGGCCAAGGCTGGAACGGGAACGGGAACGGGAACGGGAACGACGTTGCCGTTCAAAGACACCGTGGTGATGTCCGTGGAGTCGCAAGACCCTTACGTCGATTTTCGCAGGTCCATGGAGGAGATGGTGGAGGCGCAGTGCGTTAAGGACTGGGAGGGGCTCCAAGAGCTTCTCTGTTGGTATTTGAGGGTCAACGGGAAGAGCAACCATGGATATATCGTTGGTGCTTTCGTTGATTTATTGGTCGCTTTTTCGTCCTCGATTTCTAATTCCCATTCTCCGTCTTCCCCTTTATCGTTTTATAGCTCTTCTCTGTCTTCCTCTTGCAGCACTCGCTGTGTTTCTTGTTTGGAAGCCGAGGACGAGGTCGATGTAGCCACTACTTCTAGTTCTTCTTTGTTGTTAGAACAAGTTAGGGAAGACGAGGCTTGA 777 0.5277 MGKKMKLPSLLKHPHPNNKKFSSSSWPWPSCHQPRTLSFRAQNDAAFKTINAAYLDATVDTLGSSESFFTVSPDSGSFSTASEEDSRRGDSLETVIRGLRSDRLFFEQDETSSILEAKAGTGTGTGTGTTLPFKDTVVMSVESQDPYVDFRRSMEEMVEAQCVKDWEGLQELLCWYLRVNGKSNHGYIVGAFVDLLVAFSSSISNSHSPSSPLSFYSSSLSSSCSTRCVSCLEAEDEVDVATTSSSSLLLEQVREDEA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0811 258 ProSiteProfiles OVATE domain profile. 137 198 IPR006458 -
Ssu4g0811 258 MobiDBLite consensus disorder prediction 71 91 - -
Ssu4g0811 258 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 137 200 IPR006458 -
Ssu4g0811 258 MobiDBLite consensus disorder prediction 1 27 - -
Ssu4g0811 258 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 5 236 - -
Ssu4g0811 258 Pfam Transcriptional repressor, ovate 143 198 IPR006458 -
Ssu4g0811 258 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 236 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0811 Ssu-Chr4 12633161 12633937 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu4g0811 Ovate 4.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0811 - - gmx:100784899 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0811 4 12633161 12633937 Ssu7g0281 7 4628352 4629077 ECH
Ssu4g0811 4 12633161 12633937 Ssu4g0811 4 12633161 12633937 ECH
Ssu4g0811 4 12633161 12633937 Ssu7g2621 7 51761863 51765981 PCT