Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0810 ATGTCTGGCTCCAGAAAGAAGCTTCTTCTGAACACCGCGTCCGTGAAACTTGGCTGCGGCAGCTGCAGAAGACCAAAGCTGTGTCGCATGTTCCACCCAAAGCCAAAACCCAAGAACCCCACTTTCCAAAATCACAAACATTACAACCAGTCTTCTTCCTCTTCGGGTGAGGACAAGTGTGACAGTACCAGCACCACCCCCACCAACACTGCAACAACATTCTCTCCCTACGTTGGTTCCTCACAGTTTTCGGACTCAGATTCGTACGTGAAGGCCGCAAGGACAGTGGGAGGTTTGGGCAGAGCTGGCAGAGAAGGCGTGGCAGTGGAGAAAGATTCTGACGACCCTTATTTGGACTTCAGACACTCCATGCTGCAAATGATATTGGAGAACGAGATATACTCAAAGGAAGATCTCAGAGAGCTTTTGAATTGCTTTCTTCAGCTGAATTCGCCGCATCACCATGGGGTTATAGTCAGGGCTTTCACTGAGATCTGGAATGGTGTCTTCTCTGTGAGGTCCAATTCACCCAGGCTTCACATCAACCGTAAGCCACGTGATAATCAACTCTGTACCATGGCTCTTCATGGCAATGGAAACACAGCGGGCCATCATTGA 618 0.4951 MSGSRKKLLLNTASVKLGCGSCRRPKLCRMFHPKPKPKNPTFQNHKHYNQSSSSSGEDKCDSTSTTPTNTATTFSPYVGSSQFSDSDSYVKAARTVGGLGRAGREGVAVEKDSDDPYLDFRHSMLQMILENEIYSKEDLRELLNCFLQLNSPHHHGVIVRAFTEIWNGVFSVRSNSPRLHINRKPRDNQLCTMALHGNGNTAGHH 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0810 205 ProSiteProfiles OVATE domain profile. 109 168 IPR006458 -
Ssu4g0810 205 Pfam Transcriptional repressor, ovate 113 169 IPR006458 -
Ssu4g0810 205 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 174 IPR038933 GO:0045892
Ssu4g0810 205 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 107 167 IPR006458 -
Ssu4g0810 205 MobiDBLite consensus disorder prediction 42 81 - -
Ssu4g0810 205 MobiDBLite consensus disorder prediction 30 81 - -
Ssu4g0810 205 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0810 Ssu-Chr4 12596111 12599075 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu4g0810 Ovate 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0810 - - gmx:106797222 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0810 4 12596111 12599075 Ssu4g0810 4 12596111 12599075 ECH