Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0802 ATGTACCAGAAACAGCCCCAGTTGAACGGAGCCTACTACGGCCCGTCGATCCCGCCGCCGAAATCGTCGTACCACCGCCCGGGTCGCGGCGGCGGGTGCGGCTGCTGCTGCGGCTGTCTCTTCAGCCTGATCTTCAAGCTCATCCTGAGCGTGGTCATCATCGTGGGCATCGCCGCGCTCATCTTCTGGCTCATAGTCCGCCCCAACGTGGTGAAAGTCCACGTGACCGAGGCCACGCTCACCCAGTTCAACTACACCGGCGACACGCTCAACTACGACCTCGCCCTCAACATCAGCGTCCGCAACCCGAACAAGAGGCTCGGCATCTACTACGACTACATCGAAGCGCGCGCACTGTTTCAAGACGCGAGGTTCGACTCCGAGTACCCGGGCCCGTTCTACCAGGGCCACAAGACCACCACCGTGTTGGGCCCCGTGTTCAAGGGCCAACAGGTGCTGGCGCTCGACACTGACCAAACCGCGGAACTGAAGAACGAGAACGACAAGGGGGTGTACGAGATCGTTGTGAAGATGTACCTGAGGGTGAGGTTCAAGTTGGGCGTCTTCAAGACCAAGACGCTCAAGCCCAAAGTTACCTGCGAATTGAGCGTTCCTTTGAAAGGAAGCTCCGGTGTGTTTCAGACCACCAAGTGCGACTGGGATCACTGA 669 0.5934 MYQKQPQLNGAYYGPSIPPPKSSYHRPGRGGGCGCCCGCLFSLIFKLILSVVIIVGIAALIFWLIVRPNVVKVHVTEATLTQFNYTGDTLNYDLALNISVRNPNKRLGIYYDYIEARALFQDARFDSEYPGPFYQGHKTTTVLGPVFKGQQVLALDTDQTAELKNENDKGVYEIVVKMYLRVRFKLGVFKTKTLKPKVTCELSVPLKGSSGVFQTTKCDWDH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0802 222 Pfam Late embryogenesis abundant protein 97 200 IPR004864 -
Ssu4g0802 222 PANTHER OS05G0367900 PROTEIN 25 220 IPR044839 GO:0098542
Ssu4g0802 222 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 25 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0802 Ssu-Chr4 12470302 12470970 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0802 65 211 SNARE and Associated Proteins AT1G32270 36.667 3.37e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0802 - - gmx:100793187 357.451