Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0750 ATGGGTTCCCTTCCCCACGTAGTAGAGGACTGCATGGGCTTCCTCCAACTCTATAGCGACGGTTCCATTTTTCGCTCCAATGACATAGAATTCAAAGTTTCACCCATTGAAGACACCACCATAACATTCGAGGATTTTCTCTTTGACAAGagattcaacctttttctccgCCTCTACAAGCCCCAACACTTGGGACCTGACAACACGAAGCTCCCTGTTGTGATGTTCCTTCACGGGGGAGGCTTCTGTTTCGGTTCCCGCACGTGGCCCCATTTTCACAACTGTTGCATACGCCTCGCGTCGGGGCTCCACGCGGTGGTGGTCTCGCCGGACTACCGGCTGGCGCCGGAGCACCGGCTTCCGGCGGCACTGGATGACGCCGTGGAGGCGGTGAGGTGGCTCCAAAGGCAGGGGCTGAGCCTGAGGGATGATCAAAATGGTGGGGACGCGTGGCTGAGTGGCCGCGTTGACTTTGACCGCGTGTTCATCGTGGGTGACTCGTCTGGTGGGAACATTGCGCACCACCTCGCGGTTCGCTTCGGTTCCGGTTCGAGAGAGATGGACCCGGTTCGGGTACGAGGTTACGTGCTGTTTGCGCCGTTTTTCGGCGGGGAGGTTCGGACTAAGTCCGAGAAAGGTCCACCAGAGCACATGTTGAATCTCGAGTTATTAGACAGATTTTGGAGGTTGTCGATGCCTGTTGGAGAGACCAGAGACCACCCATTGGCGAATCCGTTCGGACCTGGCAGCCCAAATCTTGAACAACTGAAGCTTGATCCTATTTTGGTGATAATAGGTGGCAATGAATTGCTTAAGGATAGGGCAGCAGACTATGCTACAAGGTTAAAAGAACTAGACAAGGACATTAAATACGTTGAGTTTGAGGGGTGCGAGCATGGGTTTTTCACACATGATTCATACTCATCAGAAGTTGCAGAAGAGGTCATCCAAACCCTTAAACGATTCATGCTTGAAACTTCTAGTTTAGAAGGCACACTGCACACAcctgaaaaacaaattaaagagtAG 1029 0.5073 MGSLPHVVEDCMGFLQLYSDGSIFRSNDIEFKVSPIEDTTITFEDFLFDKRFNLFLRLYKPQHLGPDNTKLPVVMFLHGGGFCFGSRTWPHFHNCCIRLASGLHAVVVSPDYRLAPEHRLPAALDDAVEAVRWLQRQGLSLRDDQNGGDAWLSGRVDFDRVFIVGDSSGGNIAHHLAVRFGSGSREMDPVRVRGYVLFAPFFGGEVRTKSEKGPPEHMLNLELLDRFWRLSMPVGETRDHPLANPFGPGSPNLEQLKLDPILVIIGGNELLKDRAADYATRLKELDKDIKYVEFEGCEHGFFTHDSYSSEVAEEVIQTLKRFMLETSSLEGTLHTPEKQIKE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0750 342 Coils Coil 268 288 - -
Ssu4g0750 342 PANTHER ARYLACETAMIDE DEACETYLASE 4 324 - -
Ssu4g0750 342 PANTHER CARBOXYLESTERASE 15-RELATED 4 324 - -
Ssu4g0750 342 SUPERFAMILY alpha/beta-Hydrolases 4 321 IPR029058 -
Ssu4g0750 342 Pfam alpha/beta hydrolase fold 74 302 IPR013094 GO:0016787
Ssu4g0750 342 Gene3D alpha/beta hydrolase 15 330 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0750 Ssu-Chr4 11581670 11585450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0750 7 308 Carbohydrate Esterase AT5G16080 34.641 4.65e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0750 - - gmx:100803077 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0750 4 11581670 11585450 Ssu4g0750 4 11581670 11585450 ECH
Ssu7g2058 7 40786039 40787811 Ssu4g0750 4 11581670 11585450 ECH
Ssu4g0750 4 11581670 11585450 Ssu7g2691 7 54098691 54105462 PCT