Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0713 ATGAAGATAAGAATTTTCCTTGTAGCTTGTTTGGCAGTGTTCTGTATCCTAGGGGTTTGTCAAGGAGGCAGCCTCAGAAAGAATTTCTACAGGAAATTCTGTCCTCAAGCGGAGCAGATTGTTAGGACCAAAATCCAGCAACATGTTTGTGCAAGGCCCAATTTGCCTGCCAAGTTGATTAGAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGCTCGGTTTTGCTGGACTCCACCGCCACCAACTCTGCGGAGAAGGATGCCATTCCCAATTTATCTTTGTCTGGCTTTGATGTCATAGATGACATAAAAGAAGCATTGGAGGCAAAATGTCCCGGAATTGTATCTTGTGCTGATATATTAGCTTTGGCAGCTAGGGACGCTGTTTCTGTCAAATTTAATAAGCCTACGTGGGAAGTGCTTACCGGTAGAAGAGATGGCACAATATCCGTAAGTATAGAAGCCTTAACCAATCTGCCAGCACCTTTTTTCAACTTCACCCAGCTCAAACAAAGCTTTGCTAGTAAAAAGCTTACTGTGCACGACCTGGTTGTATTATCAGgAGCACACACAATTGGAATAGGCCATTGCAACTTATTCAGTAACAGGCTTTTCAACTTCACCGGAAAAGGTGatcaagatccttctttgaatCCTACATATGCCAATTTTTTGAAGACAAAATGTCAGGGTCTGAGCGACACCACCACAACAGTAGAGATGGATCCTAACAGCTCAGACACCTTTGACAGTGACTATTATTCTATCCTTCTCCAGAACAAGGGTCTATTCCAATCAGATGCTGCCCTTTTAACAACCAAGGCTGTCAAGAAACATTGTCAACGAATTGGTCAAACAAGACAAGTTCTTCACAGAGTTCGGGCAATCAATGAAGAGAATGGGAGCCATTGA 918 0.4216 MKIRIFLVACLAVFCILGVCQGGSLRKNFYRKFCPQAEQIVRTKIQQHVCARPNLPAKLIRMHFHDCFVRGCDGSVLLDSTATNSAEKDAIPNLSLSGFDVIDDIKEALEAKCPGIVSCADILALAARDAVSVKFNKPTWEVLTGRRDGTISVSIEALTNLPAPFFNFTQLKQSFASKKLTVHDLVVLSGAHTIGIGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDTTTTVEMDPNSSDTFDSDYYSILLQNKGLFQSDAALLTTKAVKKHCQRIGQTRQVLHRVRAINEENGSH 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0713 305 Gene3D Peroxidase, domain 2 162 287 - -
Ssu4g0713 305 PANTHER PEROXIDASE 25-RELATED 5 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PANTHER PEROXIDASE 5 286 - -
Ssu4g0713 305 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 SUPERFAMILY Heme-dependent peroxidases 25 284 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 Gene3D - 28 161 - -
Ssu4g0713 305 ProSiteProfiles Plant heme peroxidase family profile. 24 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Ssu4g0713 305 CDD secretory_peroxidase 25 277 IPR033905 GO:0004601|GO:0042744
Ssu4g0713 305 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu4g0713 305 Pfam Peroxidase 41 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0713 Ssu-Chr4 11115150 11116646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0713 6 284 Peroxidase AT4G11290 54.770 2.62e-106 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0713 K00430 - gmx:100775970 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0713 4 11115150 11116646 Ssu4g0713 4 11115150 11116646 ECH
Ssu4g0713 4 11115150 11116646 Ssu7g2050 7 40710226 40711601 PCT
Ssu7g2773 7 57528181 57530428 Ssu4g0713 4 11115150 11116646 PCT