Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0647 ATGATTACCATCATAGCACGCCTTATGTTTCTGCTTGCATTGTTTCTTTCGCTCCTAACAAACACTGGCCAAATTGTATTTGCAAAAGGGAATGATAATGTTAGAGAGGCTTGCAGGGTGACAAGGTACCAAAACCTTTGTGTCCACTCGCTAGCACATTTCTCTAACACTGCTGGAAGAAGCCCCAGCAAGTGGGCACGTGCAGGAGTGTCAGTGTCAATAGGCGAGGTTAAGAGCGTTCAAGCATATCTAGCAGAATTGAAGAGGCACGGACACATGAAAGGAAGAAACAGAGTTGCACTTTCAGATTGTGTTGAATCTTTCGCCTATGCCCTTGACGAGCTTCACAACTCACTTGGTGTGCTTAGGAGGCTAAGCAAAAGCACGTTTAGTACCCAAATGGGGGACCTCAACACATGGATTAGTGCAGCACTCACTGATGAAGATACTTGCCTCGAGGGGTTTGAAGGCAAAACtgagaagaaaattaaattgctacaaaacCGGGTTCAGAACGTGTCTTACATCACCAGCAACGCTCTAGCTCTTGTCAACAAACTTGCCACTACAGGTCTGGGAAGCATCAACGATCCATAG 597 0.4439 MITIIARLMFLLALFLSLLTNTGQIVFAKGNDNVREACRVTRYQNLCVHSLAHFSNTAGRSPSKWARAGVSVSIGEVKSVQAYLAELKRHGHMKGRNRVALSDCVESFAYALDELHNSLGVLRRLSKSTFSTQMGDLNTWISAALTDEDTCLEGFEGKTEKKIKLLQNRVQNVSYITSNALALVNKLATTGLGSINDP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0647 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 182 - -
Ssu4g0647 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 189 IPR035513 -
Ssu4g0647 198 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Ssu4g0647 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 187 IPR006501 GO:0004857
Ssu4g0647 198 CDD PMEI-like_3 37 189 - -
Ssu4g0647 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 187 IPR035513 -
Ssu4g0647 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Ssu4g0647 198 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 15 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0647 Ssu-Chr4 10235605 10236201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0647 34 195 Carbohydrate Esterase AT3G14310 31.548 1.99e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0647 - - gmx:100791264 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0647 4 10235605 10236201 Ssu4g0647 4 10235605 10236201 ECH