Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0585 ATGGCTTCAATTCAACGTTTGGAGAAATCTGAATATGAAGAAGAAGATCCACAAATGGACGAGATGAAGATAAAGAAGAGGAGGGAGAGGGATCGTGAATATGCGAGGCAATCACGAATGAGGAAGCAGAAGAAACTACAGGATTTGACCAATGAAGTCAACAAATTGCAAAGTGTGAACATGGAGCTAACAGAAAGCATAAAGGCTAAGGAGGAAGCGTATGCTAAGATGGAAGCTTCTAACAAAATCTTTAGGGCTCAGTATGTGGAATTGGCCGATCGATTACGCTTTTTGAAGATGATTGAAGTTGCTGAGGAGGTTAAAAAGTTATCTGTTGAGATTCCAGATCTTAAGCCTTAG 360 0.4028 MASIQRLEKSEYEEEDPQMDEMKIKKRRERDREYARQSRMRKQKKLQDLTNEVNKLQSVNMELTESIKAKEEAYAKMEASNKIFRAQYVELADRLRFLKMIEVAEEVKKLSVEIPDLKP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0585 119 Coils Coil 39 80 - -
Ssu4g0585 119 Gene3D - 19 82 - -
Ssu4g0585 119 MobiDBLite consensus disorder prediction 7 47 - -
Ssu4g0585 119 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 117 - -
Ssu4g0585 119 SUPERFAMILY Leucine zipper domain 23 77 IPR046347 GO:0003700|GO:0006355
Ssu4g0585 119 MobiDBLite consensus disorder prediction 1 47 - -
Ssu4g0585 119 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Ssu4g0585 119 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 117 - -
Ssu4g0585 119 Pfam bZIP transcription factor 21 81 IPR004827 GO:0003700|GO:0006355
Ssu4g0585 119 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 78 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0585 Ssu-Chr4 9376226 9376585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0585 1 117 bZIP Transcription Factor Family AT3G62420 39.669 1.78e-21 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu4g0585 bZIP_1 4.4e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0585 K25786 - gmx:100813053 115.161