Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0582 ATGGCTTCAATTCAACGTTTGGAGAAATCTGAATATGAAGGAGAAGATCCACAAATGGACGAggtgaagaaaaagaagaggaagaagaagaaactggAGTATCTGACCGATGAAATCAACAGATTGCAAAGTGAGAACAAGAAACTAGTAGAGAGCATAAAGGCTAAAGAGGAAGCACATGCTCGAATCGAAACTTCTAACAACATCTTCAAGGCTCAGTTTGTGGAATTGACTGATCGATTGCACTTTTTGAAGATGATTGAAGCTGCTCAAGAGGTCAAAAAATGA 288 0.3403 MASIQRLEKSEYEGEDPQMDEVKKKKRKKKKLEYLTDEINRLQSENKKLVESIKAKEEAHARIETSNNIFKAQFVELTDRLHFLKMIEAAQEVKK 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0582 95 MobiDBLite consensus disorder prediction 8 23 - -
Ssu4g0582 95 PANTHER BZIP TRANSCRIPTION FACTOR 44 25 93 - -
Ssu4g0582 95 MobiDBLite consensus disorder prediction 1 27 - -
Ssu4g0582 95 Coils Coil 25 59 - -
Ssu4g0582 95 PANTHER BZIP TRANSCRIPTION FACTOR 53 25 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0582 Ssu-Chr4 9343958 9344245 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0582 23 93 bZIP Transcription Factor Family AT3G62420 33.333 2.80e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0582 - K10357 gmx:100813053 84.3445