LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu4g0490	ATGGTAATATCCACTCATGTCTTTGTTGTGCATTCACAGTTCACACTGGTTACTCTTGGTCTCAGCCTCATAAACTCAAAGCAGGCCTCAATGTTGAAGTTGGGTTGGCAATATTTGGCCACCAAACGCATGAGATGTGGCTATGAGAAGCTAACAAGTTCGAGTCAAAAGATGATGAGGGATGGAAGAAGTTGCTGGGTGAAGTCTTTGAATGGGCGATTACGTGGCCTTCGGTTGTCACGGTCTAGGAAGGTCTCCTTAGGAGTTGTGTTGTCAAGCAGAATTGTAAGGATATACACTGAGGTTGTCAACCGAATGAACATGGAAAACATATATCCCGCTATTGTTCTATCCACTCAATGGGGCCTTCCCGTTCTGTCTCATTCCTCACACTCGGTAGCCCTGCGACAAGCCACCAACTCGAAGAACAAGCCACTAGAAATCAGAATAAAGAAGGAGAGCCCCAAAGCACTCCGTAGCCATATCCTGGAAATCAGCGGCAGCGGTGACGTGGCGGAGTGCATTGCCACCTTTGCCACATGCTGCCACTGCGGCGTGTTGGTCCTCCGCGGCACGATGTCGTCACCAACGTCACTTTCCAGCAAGCGGCGGTGGCAGGTGAGTCGTCAGCCTTCAAAGGAGGTTCAAGATTCTATTGCACTCCGATTCGTTTCTGCCAGCGCTGTTGCCACCGGAGCCCACTGGCGTATAATTTGA	717	0.5007	MVISTHVFVVHSQFTLVTLGLSLINSKQASMLKLGWQYLATKRMRCGYEKLTSSSQKMMRDGRSCWVKSLNGRLRGLRLSRSRKVSLGVVLSSRIVRIYTEVVNRMNMENIYPAIVLSTQWGLPVLSHSSHSVALRQATNSKNKPLEIRIKKESPKALRSHILEISGSGDVAECIATFATCCHCGVLVLRGTMSSPTSLSSKRRWQVSRQPSKEVQDSIALRFVSASAVATGAHWRII	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu4g0490	238	PANTHER	OS07G0633900 PROTEIN-RELATED	31	142	-	-
	Ssu4g0490	238	PANTHER	OS07G0633900 PROTEIN	31	142	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu4g0490	Ssu-Chr4	7762627	7770846	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu4g0490	137	194	AT-hook Motif Nuclear Localized (AHL) Family	AT4G14465	50.847	6.02e-09	53.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu4g0490	-		-	mtr:MTR_7g111200	101.679