Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0483 atggttgttgattttgtgcGGAAGAGGTGTGGTGGTCTTGAATCTATGTACCATTTTTTGTTCCCAACTGAGCACACGGTAGTGACAGTACTCCCGTTCCCTTACTCTGGTTCCATGGACTTCCCAAACCGAGCAGCGCATCTACTCCTCCACGCTCTCCGCCGTCCTCTTTCGTCCGATCATCCGGTGGAGTGGAAGCAGAGGCAGCACAAGAAGGTGAAGAAATCCGCCAACGGATTGATGAAGAAAAGGACGCCGGAGATTTGGAGAAGGTTGTCGGCGGTGCAGAAGAAAGCACGCGTTCCCGGACGGTTAATCCCCGGTAGCCGAAAAGAGTCGTTCTCGAAGCTTCTAGAAGAAGCCGCCGACTATATTTCAGCCTTGGGGATGCAAGTGCGACGGCTCTCGCCGACCTAA 417 0.5156 MVVDFVRKRCGGLESMYHFLFPTEHTVVTVLPFPYSGSMDFPNRAAHLLLHALRRPLSSDHPVEWKQRQHKKVKKSANGLMKKRTPEIWRRLSAVQKKARVPGRLIPGSRKESFSKLLEEAADYISALGMQVRRLSPT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0483 138 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 65 134 IPR044660 GO:0006355
Ssu4g0483 138 MobiDBLite consensus disorder prediction 61 80 - -
Ssu4g0483 138 PANTHER TRANSCRIPTION FACTOR BHLH150 65 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0483 Ssu-Chr4 7692664 7694691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0483 91 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 58.140 5.69e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0483 - - gmx:100802046 101.679