Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0437 ATGGTTTGCGAGGAAGAGTTGTTGATTGAGAAAGTCTGCGAGCTGTATGAACAAATCTCCGGCCTCGAGAGTCTCAAACCTTGCAAAAATGTCGACATGCTTTTCACCCAACTAGTCGTCACATGCATACCCCCTAGCCCCATCGATGTCACAAAACTCAACAAAACCGTGCAAGACATTAGATCCCACCTTATAAGACTCTGTGGTGAGGCTGAAGGGCACTTAGAGACCCACTACTCAACCATCCTAGGCTCATACGACAACCCCCTTGATCATCTTAATATTTTCCCCTACTATTCTAACTACCTCAAACTTGGTCTCCTTGAGTACACTATCCTTAGCCAACACTGTGCCCATGTCCCAAGCAAAATTGCCTTCGTGGGTTCAGGATCCCTTCCCTTTACTTCAATTGTCTTGGCATCAAATCACTTACCCTCCACCACTTTTCACAACTATGACATGGACCCTTTAGCCAATTCCAATGCTATGCGCTTGATTTCCTCTGACCCTGACTTGTCCAAGCGCATGGTTTTTCACACCAGTGACATATTGGATGTGTCAAACGCTTTGAAGGACTACGAGGTTGTTTACTTGGCAGCCCTTGTGGGCATGGACAAGGAGGGAAAGAATCGAATCATCGATCACTTGGCCAAGCACATGGCCCCGGGGGCACTTCTTATGTTAAGGAGTGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTGGTTGAACCTTGCGATCTTCGAGGCTTTGAGGTCCTCTCTGTGTTCCACCCCACGGATGAGGTTATCAATTCGGTTGTCATAGCACGTAAATATCCTGTGCCTATGCACTCACTTGAGCAAGGCCTTGGTTCTATGATCCTACCAAACAAGTGTTCGGAGATCCAAGCCTTCAACCCCCTCAACCATGGGAACATGATTGAGGAATTGGCCATTGAGGAGCAACTCTTGTGA 954 0.4759 MVCEEELLIEKVCELYEQISGLESLKPCKNVDMLFTQLVVTCIPPSPIDVTKLNKTVQDIRSHLIRLCGEAEGHLETHYSTILGSYDNPLDHLNIFPYYSNYLKLGLLEYTILSQHCAHVPSKIAFVGSGSLPFTSIVLASNHLPSTTFHNYDMDPLANSNAMRLISSDPDLSKRMVFHTSDILDVSNALKDYEVVYLAALVGMDKEGKNRIIDHLAKHMAPGALLMLRSAHGARAFLYPVVEPCDLRGFEVLSVFHPTDEVINSVVIARKYPVPMHSLEQGLGSMILPNKCSEIQAFNPLNHGNMIEELAIEEQLL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0437 317 PANTHER SYNTHASE, PUTATIVE-RELATED 1 316 - -
Ssu4g0437 317 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Ssu4g0437 317 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Ssu4g0437 317 PANTHER NICOTIANAMINE SYNTHASE 3 1 316 IPR004298 GO:0030410|GO:0030418
Ssu4g0437 317 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0437 Ssu-Chr4 7111307 7112260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0437 1 313 Nicotianamine Synthase Gene Family AT5G04950 60.938 1.31e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0437 K05953 - gmx:100803630 578.556